Gene detail

Gene detail information of Glyur000983s00021698

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G48280.1	1.00E-131	cytochrome P450, family 71, subfamily A, polypeptide 25
NR	KEH31104.1	0	cytochrome P450 family 71 protein [Medicago truncatula]
COG	NP_241445.1	6.00E-30	cytochrome P450 hydroxylase [Bacillus halodurans C-125]
Swissprot	tr\|Q9STK8\|C71AP_ARATH	3.00E-163	Cytochrome P450 71A25
trEMBL	tr\|A0A072UMT0\|A0A072UMT0_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:KEH31104.1}

Sequence

Transcript Sequence

>Glyur000983s00021698.1
ATGCTTTTCTTCACCATCTTTACACTCTCCCTTTCTCTTCTCTTCATCTTCATAAAATGGTATTCCAATTCNACCACCTCCAAAAACTTACCCCCTTCACCTCCAAGAATTCCTCTGCTTGGTAACCTCCATCAACTTGGCATGCTCCCTCACCGCACACTCCAAGCTTTGGCNCAAAAGTATGGACCGTTAATGTTGCTTCATCTGGGGAGGGTGCCGGTGCTTGTGGTTTCCTCTGCTGATGCAGCACGTGAGGTACTGAAAACCCATGACTTGGTCTTCTCTGATAGGCCACATCGTAAAGCATACGACATCCTATTATACGGTTCCAAAGATGTTGCAACTTCTTCATATGGCGAGTATTGGAGGCAAATAAGGAGTCTCTGTGTGTTACACCTTTTAAGCAACAAAATGGTTCAATCCTATCGACGTGTGAGAGAGGAGGAAACTGCAAGACTGATGGAACATATTAAGGAGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTGCTGCTGAATTTATCCGAGTTGTGCTCTACAGTTGCGAATGATATAGTGTGCAGGGTGGCTCTGGGAAAGAGATACCGTGAAGAAGGGGGAAAGAGGAAGTTTCAACCGTTGTTGTTGGAGTTTGGGGAGTTATTGGGTACCATTTGTATAGGGGACTGTATACCTTGGCTTGATTGGTTGAGTAAGGTTAATGGTTTCTATGGCAGAGCAGAAAGAGTTGCCAAACAATTGGACGAGTTTCTAGATGAAGTAATTGAGAAGCACATTCGTTGTGGGTCGAGGAATGGCACTGATGGGAATGTTGGTGTGGCTAGTGAGGACCATAATGATTTTGTGGACGTTTTGCTTTCGGACATGTTTTTTGCTGCTACTGACACTACCTCCGTAGTCCTAGAGTGGGCAATGGCAGAGCTGTTAAAGAACCCAATTGTGATGCATAGATTGCAAGATGAGGTGAGAAGTGTGGTTGGTAACAGAAATGATCATGTAACCGAGGAGGATTTGGGTCACATGAACTACTTGAAGGCTACAATTAAGGAAACTCTTCGTCTCCATATCCCAGTTCCCTTACTAGCCCCTCGAAAATCTATGAAAGATATCACACTGAATGGCTATGATATTGCAGCTGGCACACAGGTAATGGTGAATGCTTGGGCAATTGGAAGAGATGCTTCATATTGGGACCAACCTCTAGAGTTCAAACCAGAAAGGTTCCTCAACAGTTCAATAGATTTCAAAGGAAAAGATTTTGAGTTTATCCCATTTGGAGCAGGAAGGAGGGGTTGCCCTGGGGGGCCATTTGCCATTGTTATCACTGAGATGGTACTAGCAAACCTTGTCCACCAATTTGATTGGAAATTGCCTGATGGAGTAACAGAGAAGGACTTGGACATGTGTGAGGCTTTTGGCCTTACATGTCATAGAAAATATCCTCTCCTTGCAGTAGCAATGACATATGAGAGAGAGAAATGATATCAATCAATAATTAATTAATTAATAATAAAACAACCACAAGGAAAATAATAAGATATGACAAAAGAGAATAAAGATGTGTAAGATAGTGTGTTATGTGAGACCCTTATAAGTTGTGGATGCAGTTGTGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00983	96531	99443	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71A25

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000983s00021698.1	PF00067.17	p450	31	480	2.10E-99

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.545
SRR1783600	control	0.504
SRR1783602	moderate drought stress	0.098
SRR1811619	moderate drought stress	0.084

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.090
DRR006520	Root Summer glycyrrhizin high producing strain	0.191
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.826
DRR006524	Root Summer glycyrrhizin low producing strain	0.764
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.202
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.290

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.393
SRR2868004	Drought Stress (root)	0.078
SRR2967015	Control (root)	0.032

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.207
SRR9715740	Leaf	22.214
SRR9715741	Leaf	10.913
SRR9715739	Root	0.157
SRR9715742	Root	0.800
SRR9715743	Root	1.050

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.050
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.109
SRR8749031	Uninduced	0.104
SRR8749032	Uninduced	0.035

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.658
SRR8400027	Control - Root	7.512