Gene detail information of Glyur000982s00031398 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17620.3 | 2.00E-13 | glycine-rich protein |
| NR | KHN34887.1 | 7.19E-20 | Protein Dom3z like, chloroplastic [Glycine soja] |
| Swissprot | tr|Q8RY73|DXO_ARATH | 9.00E-15 | Decapping nuclease DXO homolog, chloroplastic (Precursor) |
| trEMBL | tr|I1J9P9|I1J9P9_SOYBN | 1.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G41250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00982 | 24495 | 25841 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.662 |
| SRR1783600 | control | 3.173 |
| SRR1783602 | moderate drought stress | 5.426 |
| SRR1811619 | moderate drought stress | 5.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.819 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.723 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.453 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.547 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.610 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.366 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.160 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.617 |
| SRR2868004 | Drought Stress (root) | 4.103 |
| SRR2967015 | Control (root) | 6.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.078 |
| SRR9715740 | Leaf | 9.329 |
| SRR9715741 | Leaf | 5.498 |
| SRR9715739 | Root | 1.498 |
| SRR9715742 | Root | 2.613 |
| SRR9715743 | Root | 2.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.354 |
| SRR8749028 | MeJA induced 9h | 0.922 |
| SRR8749029 | MeJA induced 9h | 1.162 |
| SRR8749030 | Uninduced | 2.293 |
| SRR8749031 | Uninduced | 1.678 |
| SRR8749032 | Uninduced | 1.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.344 |
| SRR8400027 | Control - Root | 3.526 |