Gene detail

Gene detail information of Glyur000981s00037081

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G03610.1	2.00E-87	GDSL-like Lipase/Acylhydrolase superfamily protein
NR	XP_003542597.1	1.25E-143	PREDICTED: GDSL esterase/lipase At5g03610-like [Glycine max]
COG	YP_007091764.1	4.00E-16	G-D-S-L family lipolytic protein [Chroococcidiopsis thermalis PCC 7203]
Swissprot	tr\|Q9LZS7\|GDL71_ARATH	1.00E-109	GDSL esterase/lipase At5g03610 (Precursor)
trEMBL	tr\|I1LZI9\|I1LZI9_SOYBN	5.00E-144	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G21970.1}

Sequence

Transcript Sequence

>Glyur000981s00037081.1
ATAGTTCTCTCAAACCTCACCTTAGCTCTTTCCTTCCCTCAACAAGCTATAACCATTGTTAATTCAGTTATATTCCTCTATCCNAGCTTCTTAATCACTTCACTTGAAAACGCCTATTGCACGTCTAGCGTAATTCCATGGCTATATTATTCATGATGGACTCACACAAGCAACTGTTTTCCCTCTTATGTCTCTCCCTGGTACTTGCACTCCTCTCAGGACAAATGGGGCTGCAAGCTGAAGCTCGTGACAGTCCCTCAAAAAAANTGTTCGTATTTGGGGACTCTTATGTTGATACCGGCAACACTAGAANAGATCAACCTGGTTCATGGAAAGACCCTTATGGCATAACCTTTCCCGGAAAACCCGCCGGAAGATTCTCCAACGGCAGAGTTCTAACTGACTTCATTGCCAAGTATTTGGGACTGAGATCACCACTCCCCTATCAATTCAGGAAANAGAAGCCTCAATATTTGAAGTATGGGGTGAACTTTGCGATTGGTGGTACAGGTGTATTTGATACAGATCAAGGCCAAAATATGACAACCCAGATTGATTTCTTAGAGCAGCTCATCGAAGAAAAAGTGTACACTGCTTCAGATCTCAACAACTCAGTGGCTCTNGTCTCCGTCGCTGGGAATGACTACCGTCATTACTTATTTGACTTAAAGCTCCCAGTCCTGCAAACCACCACCAATTTGATTCGTCTCCAAAAGTTGGGAGTGAAGAAAATTTTAGTGGGTGCTTTACAACCCCTTGGTTGCCTTCCTCTAATCACAACCCCATCCTTGTTCGAACACTGCGATGATACCATTAACATCGTCGTAAATNTCCACAACATCCTATTGAGCCAACAGGTGACCAAGTTGAACCAAGAAACCAAGGATCACAACAAGACCTTCGTAGTTCTCGACCTTTACNACAGTTTCATGTCAGCACTGATGAACCATTCTTCAAGTAGTAACTTCACAGACCCGTTGAAGCCATGCTGTGTTGGGGTAAGTAGCCAATACTTTTGTGGGAGCGTGGGNGAGAATAACGAGAAGAAATATAAGGTTTGCGAAAATCCCAAATCGGCTTTCTTTTGGGATGTCTTCCACCCAACACAAGCAGGTTGGAATGCTGTGTACAAAAAGTTACAGGAGGGATCTCTTCCTCCGCTTCTAAAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00981	7953	12190	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016788 hydrolase activity, acting on ester bonds

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000981s00037081.1	PF00657.17	Lipase_GDSL	45	333	1.90E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	97.112
SRR1783600	control	95.498
SRR1783602	moderate drought stress	119.623
SRR1811619	moderate drought stress	117.885

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	31.936
DRR006520	Root Summer glycyrrhizin high producing strain	31.050
DRR006521	Root Winter glycyrrhizin high producing strain	1.113
DRR006522	Root Winter glycyrrhizin high producing strain	1.268
DRR006523	Root Summer glycyrrhizin low producing strain	0.093
DRR006524	Root Summer glycyrrhizin low producing strain	0.171
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.822
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.969

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	133.523
SRR2868004	Drought Stress (root)	117.907
SRR2967015	Control (root)	146.104

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	51.236
SRR9715740	Leaf	68.599
SRR9715741	Leaf	22.559
SRR9715739	Root	52.578
SRR9715742	Root	125.888
SRR9715743	Root	110.666

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	346.066
SRR8400027	Control - Root	175.986