Gene detail information of Glyur000980s00032520 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH42466.1 | 3.46E-07 | auxin response factor [Medicago truncatula] |
| trEMBL | tr|A0A072VLI2|A0A072VLI2_MEDTR | 1.00E-07 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00980 | 62733 | 66472 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.425 |
| SRR1783600 | control | 2.454 |
| SRR1783602 | moderate drought stress | 1.704 |
| SRR1811619 | moderate drought stress | 1.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.931 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.426 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.627 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.731 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.278 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.079 |
| SRR2868004 | Drought Stress (root) | 4.048 |
| SRR2967015 | Control (root) | 3.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.097 |
| SRR9715740 | Leaf | 1.567 |
| SRR9715741 | Leaf | 2.213 |
| SRR9715739 | Root | 0.345 |
| SRR9715742 | Root | 1.420 |
| SRR9715743 | Root | 0.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.639 |
| SRR8749028 | MeJA induced 9h | 21.296 |
| SRR8749029 | MeJA induced 9h | 21.078 |
| SRR8749030 | Uninduced | 15.829 |
| SRR8749031 | Uninduced | 14.385 |
| SRR8749032 | Uninduced | 10.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.212 |
| SRR8400027 | Control - Root | 8.841 |