Gene detail information of Glyur000979s00026378


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59840.14.00E-91Ras-related small GTP-binding family protein
NRXP_003625516.11.92E-156Ras-like protein [Medicago truncatula]
COGYP_008431664.19.00E-30hypothetical protein N186_01315 [Thermofilum sp. 1910b]
Swissprottr|O24466|RAE1A_ARATH2.00E-144Ras-related protein RABE1a
trEMBLtr|G7L0L9|G7L0L9_MEDTR7.00E-157RAB GTPase-like protein A5B {ECO:0000313|EMBL:AES81734.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0097923405709-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0006886  intracellular protein transport

GO:0006913  nucleocytoplasmic transport

GO:0007165  signal transduction

GO:0007264  small GTPase mediated signal transduction

GO:0015031  protein transport


cellular_component

GO:0005622  intracellular

GO:0016020  membrane


molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000979s00026378.1PF00071.17Ras171781.60E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.216
SRR1783600control28.066
SRR1783602moderate drought stress17.878
SRR1811619moderate drought stress17.572

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.980
DRR006520Root Summer glycyrrhizin high producing strain37.915
DRR006521Root Winter glycyrrhizin high producing strain29.226
DRR006522Root Winter glycyrrhizin high producing strain28.953
DRR006523Root Summer glycyrrhizin low producing strain27.340
DRR006524Root Summer glycyrrhizin low producing strain27.190
DRR006525Leaf Summer glycyrrhizin high producing strain12.155
DRR006526Leaf Summer glycyrrhizin high producing strain12.958

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)48.788
SRR2868004Drought Stress (root)40.631
SRR2967015Control (root)41.648

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf15.940
SRR9715740Leaf16.550
SRR9715741Leaf23.448
SRR9715739Root13.214
SRR9715742Root12.593
SRR9715743Root14.670

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.786
SRR8749028MeJA induced 9h32.263
SRR8749029MeJA induced 9h22.993
SRR8749030Uninduced19.615
SRR8749031Uninduced1.482
SRR8749032Uninduced11.523

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root31.792
SRR8400027Control - Root32.233