Gene detail information of Glyur000978s00031817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26220.1 | 4.00E-63 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_004490320.1 | 2.77E-103 | PREDICTED: uncharacterized N-acetyltransferase ycf52-like [Cicer arietinum] |
| COG | YP_007134888.1 | 2.00E-28 | GCN5-related N-acetyltransferase [Stanieria cyanosphaera PCC 7437] |
| Swissprot | tr|Q1XDU5|YCF52_PYRYE | 3.00E-33 | Uncharacterized N-acetyltransferase ycf52 |
| trEMBL | tr|G7ICB6|G7ICB6_MEDTR | 1.00E-92 | Uncharacterized protein {ECO:0000313|EMBL:AFK47766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00978 | 20238 | 22288 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000978s00031817.1 | PF00583.19 | Acetyltransf_1 | 105 | 174 | 2.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.158 |
| SRR1783600 | control | 0.154 |
| SRR1783602 | moderate drought stress | 0.405 |
| SRR1811619 | moderate drought stress | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.437 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.480 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.258 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.292 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.285 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.205 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.237 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.913 |
| SRR2868004 | Drought Stress (root) | 1.351 |
| SRR2967015 | Control (root) | 0.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.778 |
| SRR9715740 | Leaf | 14.355 |
| SRR9715741 | Leaf | 11.946 |
| SRR9715739 | Root | 0.325 |
| SRR9715742 | Root | 1.197 |
| SRR9715743 | Root | 1.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.048 |
| SRR8749028 | MeJA induced 9h | 0.549 |
| SRR8749029 | MeJA induced 9h | 0.722 |
| SRR8749030 | Uninduced | 0.238 |
| SRR8749031 | Uninduced | 0.071 |
| SRR8749032 | Uninduced | 0.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.163 |
| SRR8400027 | Control - Root | 1.752 |