Gene detail information of Glyur000976s00028353 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02770.1 | 2.00E-27 | |
| NR | XP_007162703.1 | 1.74E-44 | hypothetical protein PHAVU_001G173200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LZ08|MOS11_ARATH | 8.00E-32 | Protein MODIFIER OF SNC1 11 |
| trEMBL | tr|V7CWZ7|V7CWZ7_PHAVU | 6.00E-45 | Uncharacterized protein {ECO:0000313|EMBL:ESW34697.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00976 | 66674 | 80557 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.642 |
| SRR1783600 | control | 11.502 |
| SRR1783602 | moderate drought stress | 11.529 |
| SRR1811619 | moderate drought stress | 11.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.362 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.636 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.497 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.965 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.270 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.695 |
| SRR2868004 | Drought Stress (root) | 13.329 |
| SRR2967015 | Control (root) | 12.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.889 |
| SRR9715740 | Leaf | 6.534 |
| SRR9715741 | Leaf | 7.514 |
| SRR9715739 | Root | 11.541 |
| SRR9715742 | Root | 8.591 |
| SRR9715743 | Root | 8.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.333 |
| SRR8749028 | MeJA induced 9h | 17.193 |
| SRR8749029 | MeJA induced 9h | 22.459 |
| SRR8749030 | Uninduced | 7.276 |
| SRR8749031 | Uninduced | 4.095 |
| SRR8749032 | Uninduced | 6.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.696 |
| SRR8400027 | Control - Root | 14.710 |