Gene detail information of Glyur000975s00029570.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37260.1 | 4.00E-63 | myb domain protein 73 |
| NR | XP_007155887.1 | 2.17E-148 | hypothetical protein PHAVU_003G240200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 1.00E-78 | Transcription factor MYB44 |
| trEMBL | tr|V7CG42|V7CG42_PHAVU | 8.00E-149 | Uncharacterized protein {ECO:0000313|EMBL:ESW27881.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00975 | 52123 | 52977 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
| EAR motif-containing Proteins | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000975s00029570.1 | PF13921.1 | Myb_DNA-bind_6 | 17 | 75 | 1.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.681 |
| SRR1783600 | control | 40.033 |
| SRR1783602 | moderate drought stress | 179.581 |
| SRR1811619 | moderate drought stress | 178.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 195.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 191.915 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 79.876 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 78.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 250.135 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 247.764 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.932 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 63.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 97.941 |
| SRR2868004 | Drought Stress (root) | 136.223 |
| SRR2967015 | Control (root) | 170.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 90.242 |
| SRR9715740 | Leaf | 130.881 |
| SRR9715741 | Leaf | 62.986 |
| SRR9715739 | Root | 347.236 |
| SRR9715742 | Root | 179.460 |
| SRR9715743 | Root | 201.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 299.989 |
| SRR8749028 | MeJA induced 9h | 230.402 |
| SRR8749029 | MeJA induced 9h | 146.465 |
| SRR8749030 | Uninduced | 145.511 |
| SRR8749031 | Uninduced | 57.253 |
| SRR8749032 | Uninduced | 137.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 71.616 |
| SRR8400027 | Control - Root | 195.511 |