Gene detail information of Glyur000974s00028642 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G46560.1 | 3.00E-15 | Tim10/DDP family zinc finger protein |
| NR | KEH29048.1 | 1.81E-28 | import inner membrane translocase protein [Medicago truncatula] |
| Swissprot | tr|Q9XGX8|TIM9_MESCR | 8.00E-23 | Mitochondrial import inner membrane translocase subunit Tim9 |
| trEMBL | tr|A0A072UIX3|A0A072UIX3_MEDTR | 7.00E-29 | Import inner membrane translocase protein {ECO:0000313|EMBL:KEH29048.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00974 | 89852 | 91599 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000974s00028642.1 | PF02953.10 | zf-Tim10_DDP | 32 | 62 | 2.90E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.514 |
| SRR1783600 | control | 3.489 |
| SRR1783602 | moderate drought stress | 2.043 |
| SRR1811619 | moderate drought stress | 2.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.937 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.864 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.082 |
| SRR2868004 | Drought Stress (root) | 5.524 |
| SRR2967015 | Control (root) | 3.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.836 |
| SRR9715740 | Leaf | 1.653 |
| SRR9715741 | Leaf | 1.313 |
| SRR9715739 | Root | 1.148 |
| SRR9715742 | Root | 3.157 |
| SRR9715743 | Root | 3.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.414 |
| SRR8749028 | MeJA induced 9h | 12.819 |
| SRR8749029 | MeJA induced 9h | 20.230 |
| SRR8749030 | Uninduced | 0.654 |
| SRR8749031 | Uninduced | 1.871 |
| SRR8749032 | Uninduced | 1.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.569 |
| SRR8400027 | Control - Root | 4.065 |