Gene detail information of Glyur000974s00028641 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ABD28496.1 | 1.43E-12 | Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] |
| trEMBL | tr|Q2HVF1|Q2HVF1_MEDTR | 5.00E-13 | Polynucleotidyl transferase, Ribonuclease H fold {ECO:0000313|EMBL:ABD28496.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00974 | 81733 | 81969 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000974s00028641.1 | PF13456.1 | RVT_3 | 10 | 77 | 3.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.587 |
| SRR1783600 | control | 0.419 |
| SRR1783602 | moderate drought stress | 2.321 |
| SRR1811619 | moderate drought stress | 2.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.361 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.511 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.696 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.632 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.456 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.920 |
| SRR2868004 | Drought Stress (root) | 2.619 |
| SRR2967015 | Control (root) | 3.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.836 |
| SRR9715740 | Leaf | 1.562 |
| SRR9715741 | Leaf | 1.659 |
| SRR9715739 | Root | 0.526 |
| SRR9715742 | Root | 1.189 |
| SRR9715743 | Root | 0.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.834 |
| SRR8749028 | MeJA induced 9h | 5.047 |
| SRR8749029 | MeJA induced 9h | 2.290 |
| SRR8749030 | Uninduced | 1.155 |
| SRR8749031 | Uninduced | 0.538 |
| SRR8749032 | Uninduced | 1.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.549 |
| SRR8400027 | Control - Root | 3.383 |