Gene detail

Gene detail information of Glyur000973s00026307

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G27870.1	0	ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
NR	XP_003525666.1	0	PREDICTED: putative phospholipid-transporting ATPase 8-like isoform X1 [Glycine max]
COG	YP_006180041.1	1.00E-12	heavy metal-transporting P-type ATPase [Halobacillus halophilus DSM 2266]
Swissprot	tr\|Q9LK90\|ALA8_ARATH	0	Putative phospholipid-transporting ATPase 8
trEMBL	tr\|I1K1G8\|I1K1G8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G08630.1}

Sequence

Transcript Sequence

>Glyur000973s00026307.1
CCCATTTTTAGGTAAAGGGGTTGGCCTAATTTTTCTTTTTTTCCTTTCTACTTTGGTGCTTTCATTCTTCACAGTAGGTGAGGGTGGAAAAAGAACTTTGCTTGAGGTGCTTCTTTGTGATGGGTGTTTCTGTGATTCCTAGGAAAACTAGAGGATCGGTTGGATTTTATAGGTGAAGAGAAAAAAGAAGAGAATTTGAAGGAAAAAAAATATGCCTGAAGGGGTTAAAAAAAGGATACATTTTAGCAAACTATACTCTTTTTCATGTTTGAGATCTCCATTTAGAGATGGCCATTCCCAGATTGGGCAGAAAGGGTACTCAAGGGTTGTTTACTGCAATGATCCTGATAACCCTGAAGCAATTCAGTTGAATTATGGGGGAAACTATGTTTCAACTACCAAGTACACTGCTTTCAATTTCATCCCAAAGTCTTTGTTTGAGCAGTTCAGAAGGGTTGCAAACATCTACTTCCTCATTGTTGCTTGTGTTTCATTTAGTCCCTTGGCACCTTTTACACCTCTAAGTATTGTTGCACCCTTGCTGCTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAGGATTGGAGAAGGAGAAAACAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGTAAAAACTATACATTTGTGGAGACTAGATGGAAGAAACTCCGCGTTGGTGATATCATTAAAGTGTATAAGGATGAATACTTTCCTTCTGATCTTCTTCTGCTTTCGTCAAGCTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTCGATGGAGAAACTAATCTAAAATTGAAACATGCCTTGGAGGTGACAANTCATCTTCATAATGAAAAATCTCTCCAAAAGTTTAGGGCTATGGTAAAATGTGAGGATCCTAATGAAAATCTATACTCATTTATTGGAACTTTACAATATGAGGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGATTCTAAGCTGAAAAACACTGAATATATCTATGGTGTTGTTATCTTTACCGGACATGATACAAAAGTGATGCAGAATTCCACTGATCCACCATCCAAGAGAAGCAAAATNGAGAGAAAAATGGATAAGATAATATACATCCTCTTCAGTACCTTGATTTTGATATCCTTTGTTGGTTCTCTCTTTTTCGGTGTTCAGACCAAAAGGGATATTAGTAATGGCAAGTACAGAAGATGGTATCTTCGTCCGGACGATACAACAGTGTTTTATGATCCTAGAGGGGCAACCCTTGCTTCTATTCTTCACTTTTTGACTGCCCTTATGTTGTATGGATATCTAATTCCAATATCACTCTATGTGTCCATAGAAATGGTGAAAGTTCTGCAGAGTATTTTCATCAACCAAGATCAGGAAATGTATTATGAAGAAATAGATAGGCCGGCTCGTGCGCGCACGTCTAATTTGAATGAGGAGCTTGGTCAGGTTGACACGATATTGTCTGACAAAACCGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCATAGGGGGCATTCCATATGGTCGCGGCATGACAGAAGTGGAGAAGGCACTTGCTAGGAGAGGGAAAAATGGGGAATCTGAAGTTGTTGATGGTGTGTCATCTGATTTCTCGGGCCAGAATAGTGATGCCGTCAACTCTCAGAAGCCAATTAAGGGCTTTAACTTTAGAGACGAACGCATAATGAATGGGAGATGGGTTAATGAACCGCGTCCGGACATCATACAGAGATTCTTTCGAGTTTTAGCTATATGCCATACAGCTATTCCAGATGTAGATAAAGAGTCGGGAGAAATTTCCTATGAAGCCGAGTCACCGGATGAAGCAGCATTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTCGCGAGGACACAAACAAGCATATCGTTGCACGAGTTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTNGCGCAAAAGAATGTCAGTGATAGTGAGGAATGAGGAGAATCAACTATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGNCTCTCACCACATGGAAGACAGTTTGAGGCTGAAACCAAGGATCATATCAAAAGATATTCCGAGGCAGGTTTAAGAACTCTTGTAGTCGCNTATCGTGAACTTGACGAAGAAGAATATAAGCTGTGGGACAAGGAGTTCTCAAAGGCCAAAACTTCTTTNGCAGAAGACCGAGATGCACTGGTGGATGAGGCGTCTGACAAGATGGAAAGAGATTTGATACTACTTGGAGCTACAGCAGTTGAGGATAGACTGCAAAAAGGGGCAAGAATCAAGCTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAAAAGATAGTGATCACTCTCGATTCACCGGATATCCTATCGCTGGAGAAACAAGGGAACAAGGAGGCTCTAGTAAAGGCCTCTCTTGAAAGCATCGAGAAGCAAATTAGAGAGGGAATCTCGCAAATCCACTCNGCGAAAGAGAGTTCCGGTACAGAAAGAGAAAGTCCTTCCTCATTTGGCTTGATAATTGATGGGAAGTCCTTGGACTATTCTCTTAACAAGAATTTGGAAAAGTCCTTCTTTGAGCTGGCAATTAATTGCGCTTCTGTCATATGTTGCCGATCTTCACCGAAACAGAAAGCTCGTGTTACAAGAATGGTGAAATTGGGAACGAGGAAAACGATCTTATCTATTGGCGATGGGGCGAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTCGCAATTGGTCAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGAAGAATATCACTGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAACCTGCTTACAATGATTGGTACATGTCATTTTACAACGTGTTCTTCACTTCGCTTCCGGTAATCGCTCTCGGTGTTTTCGACCAGGACGTTTCCGCCAAACTTTGCCGAAAGTATCCCTTTCTATATCTAGAGGGAGTAGAGGACACACTCTTCAGCTGGCCCCTGATTCTCGGTTGGATGTTGAACGGATTCATTAGTTCCTTACTCATCTTCTTCTTGACCGCTTATTGTGTCCTAAACCAGGCCTTCAGAAGTGACGGCAAGGTGGTCGATCTCGAGATACTCGGNGTGATCATGTACACTTGTGTGGTGTGGGCTGTGAACTGCCAAATGGCACTTTCCATCAACTACTTCACATGGATCCAGCATTTCTTCATATGGGGTAGCATTGCATTCTGGTATGTATTCTTGTTGTTCTATGGTTATGTCACACCATCCATATCCACAACAGCTTATAGGGTATTTGTGGAAGCATGTGCTCCTAGTGGCCTTTATTGGATGGCTACCCTTTTGATTGTTATATGTGTTCTTCTACCATATTTCTCCTATAGAGCTTTCCAAAGTCGGTTTCTACCAATGTACCATGATATCATACAGAGAAGAAGAGTTGAATTAGGGCCTGAAATTGAGATATCTGATGAGTTACCTGAACAAGTACAAGGTAAACTAATACATCTGAGAGAGAGATTGAAGCATGGAACCATGAGTATTGTGTAATTTGGTTTCTTTGCTTAGTTTGGAAAAGTGGCTTTGAAGGAGTAAGCATTTGCAAATAGAATTTTTATTTTTTTTCTAATAGCTAATTTCATTTGTTTTTTTTTTCCTTCCAAAAATTAGCAGAGGCAGGATTTGAAAGAGATTAGCTATGTAAAGCTTGTGTGATTTGTTGTACCAAAAATAGCCCATGTATTTGTTAATGGAAGAAGCAATACA

Protein Sequence

>Glyur000973s00026307.1
MPEGVKKRIHFSKLYSFSCLRSPFRDGHSQIGQKGYSRVVYCNDPDNPEAIQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFTPLSIVAPLLLVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGKNYTFVETRWKKLRVGDIIKVYKDEYFPSDLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTXHLHNEKSLQKFRAMVKCEDPNENLYSFIGTLQYEGKEYPLSLQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNSTDPPSKRSKXERKMDKIIYILFSTLILISFVGSLFFGVQTKRDISNGKYRRWYLRPDDTTVFYDPRGATLASILHFLTALMLYGYLIPISLYVSIEMVKVLQSIFINQDQEMYYEEIDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKNGESEVVDGVSSDFSGQNSDAVNSQKPIKGFNFRDERIMNGRWVNEPRPDIIQRFFRVLAICHTAIPDVDKESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSXRKRMSVIVRNEENQLLLLCKGADSVMFEXLSPHGRQFEAETKDHIKRYSEAGLRTLVVAYRELDEEEYKLWDKEFSKAKTSXAEDRDALVDEASDKMERDLILLGATAVEDRLQKGARIKLWVLTGDKMETAVNIGYACSLLRQDMKKIVITLDSPDILSLEKQGNKEALVKASLESIEKQIREGISQIHSAKESSGTERESPSSFGLIIDGKSLDYSLNKNLEKSFFELAINCASVICCRSSPKQKARVTRMVKLGTRKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIGQFRFLERLLLVHGHWCYRRISLMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCRKYPFLYLEGVEDTLFSWPLILGWMLNGFISSLLIFFLTAYCVLNQAFRSDGKVVDLEILGVIMYTCVVWAVNCQMALSINYFTWIQHFFIWGSIAFWYVFLLFYGYVTPSISTTAYRVFVEACAPSGLYWMATLLIVICVLLPYFSYRAFQSRFLPMYHDIIQRRRVELGPEIEISDELPEQVQGKLIHLRERLKHGTMSIV

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00973	94331	101532	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0015914 phospholipid transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0000287 magnesium ion binding

GO:0004012 phospholipid-translocating ATPase activity

GO:0005524 ATP binding

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000973s00026307.1	PF00122.15	E1-E2_ATPase	112	387	9.40E-13
Glyur000973s00026307.1	PF12710.2	HAD	423	875	3.90E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.209
SRR1783600	control	4.198
SRR1783602	moderate drought stress	4.633
SRR1811619	moderate drought stress	4.603

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.806
DRR006520	Root Summer glycyrrhizin high producing strain	3.660
DRR006521	Root Winter glycyrrhizin high producing strain	15.708
DRR006522	Root Winter glycyrrhizin high producing strain	15.342
DRR006523	Root Summer glycyrrhizin low producing strain	3.417
DRR006524	Root Summer glycyrrhizin low producing strain	3.291
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.232
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.207

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.329
SRR2868004	Drought Stress (root)	20.203
SRR2967015	Control (root)	23.067

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.253
SRR9715740	Leaf	2.953
SRR9715741	Leaf	4.673
SRR9715739	Root	0.585
SRR9715742	Root	7.932
SRR9715743	Root	5.796

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.640
SRR8749028	MeJA induced 9h	2.181
SRR8749029	MeJA induced 9h	1.171
SRR8749030	Uninduced	2.720
SRR8749031	Uninduced	3.086
SRR8749032	Uninduced	2.591

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.742
SRR8400027	Control - Root	17.279