Gene detail information of Glyur000973s00026296 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14450.1 | 8.00E-107 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | XP_003524542.1 | 0 | PREDICTED: GDSL esterase/lipase At5g14450-like [Glycine max] |
| COG | YP_003886285.1 | 1.00E-15 | G-D-S-L family lipolytic protein [Cyanothece sp. PCC 7822] |
| Swissprot | tr|Q9LY84|GDL76_ARATH | 3.00E-130 | GDSL esterase/lipase At5g14450 (Precursor) |
| trEMBL | tr|I1K1F8|I1K1F8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G08540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00973 | 40189 | 44251 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000973s00026296.1 | PF00657.17 | Lipase_GDSL | 45 | 368 | 2.00E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.553 |
| SRR1783600 | control | 11.495 |
| SRR1783602 | moderate drought stress | 2.419 |
| SRR1811619 | moderate drought stress | 2.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.954 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.798 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.760 |
| SRR2868004 | Drought Stress (root) | 5.478 |
| SRR2967015 | Control (root) | 5.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.802 |
| SRR9715740 | Leaf | 0.423 |
| SRR9715741 | Leaf | 0.900 |
| SRR9715739 | Root | 2.881 |
| SRR9715742 | Root | 9.673 |
| SRR9715743 | Root | 8.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.220 |
| SRR8749028 | MeJA induced 9h | 0.142 |
| SRR8749029 | MeJA induced 9h | 0.359 |
| SRR8749030 | Uninduced | 0.194 |
| SRR8749031 | Uninduced | 0.185 |
| SRR8749032 | Uninduced | 0.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.751 |
| SRR8400027 | Control - Root | 28.893 |