Gene detail information of Glyur000973s00026293 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G23740.1 | 1.00E-93 | Oxidoreductase, zinc-binding dehydrogenase family protein |
| NR | XP_004489284.1 | 1.98E-160 | PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] |
| COG | YP_003584286.1 | 3.00E-45 | zinc-type alcohol dehydrogenase [Zunongwangia profunda SM-A87] |
| Swissprot | tr|Q84V25|ENOXE_FRAAN | 5.00E-135 | 2-methylene-furan-3-one reductase |
| trEMBL | tr|Q43677|Q43677_VIGRA | 2.00E-152 | Auxin-induced protein {ECO:0000313|EMBL:AAA87182.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00973 | 13840 | 17231 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000973s00026293.1 | PF08240.7 | ADH_N | 59 | 120 | 6.30E-11 |
| Glyur000973s00026293.1 | PF13602.1 | ADH_zinc_N_2 | 195 | 299 | 8.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.038 |
| SRR1783600 | control | 0.038 |
| SRR1783602 | moderate drought stress | 0.058 |
| SRR1811619 | moderate drought stress | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.058 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.056 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.593 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.912 |
| SRR2868004 | Drought Stress (root) | 0.461 |
| SRR2967015 | Control (root) | 0.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 192.122 |
| SRR9715740 | Leaf | 48.468 |
| SRR9715741 | Leaf | 150.932 |
| SRR9715739 | Root | 0.040 |
| SRR9715742 | Root | 0.163 |
| SRR9715743 | Root | 0.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.199 |
| SRR8749028 | MeJA induced 9h | 0.574 |
| SRR8749029 | MeJA induced 9h | 0.450 |
| SRR8749030 | Uninduced | 1.556 |
| SRR8749031 | Uninduced | 1.309 |
| SRR8749032 | Uninduced | 1.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.892 |
| SRR8400027 | Control - Root | 0.258 |