Gene detail

Gene detail information of Glyur000972s00027758

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G50160.1	0	ferric reduction oxidase 8
NR	XP_003549599.1	0	PREDICTED: ferric reduction oxidase 8, mitochondrial-like [Glycine max]
COG	YP_007146260.1	8.00E-29	putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprot	tr\|Q8VY13\|FRO8_ARATH	0	Ferric reduction oxidase 8, mitochondrial (Precursor)
trEMBL	tr\|I1MTD0\|I1MTD0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G09260.1}

Sequence

Transcript Sequence

>Glyur000972s00027758.1
ATCACATACTAAATGAAGTGGAGAAAAAAAGACCCTGACGCGTGGTAGAGGCAGTCAAACATGGCAAACGCCACTTTACTTGCTATTCTAAAACTGCTTATTATTTTCATATTCGCAGCTTGGGTTTCTCTTTGGCTTCTGAAGCCAACCCAAGTATGGACCAAAAAATGGAAACAAGCAGAAGAAAGCGCCAGCAATACAATTTTTGGATACTATGGTCTAAACTTCGCTGTTTATACATTTCCTATAATTGCTATTGCTATAATTGGACTTCTTTTCTTGGATTTGAAAGCTAGATATCAAAGAAGCAGAAGTGCAAGGAGTCCATCGATTGTCTTCTCAAACCCACTGGTGGTGAATAGTCTATTGGGAATCTTATCCAGTGTTGAACTATTGGTAGCTTTTCTCTNCATTGTCTTCTTGGCATGGACTTATTATGCTCGTATTTCTAATGATTTCAAAAAGTTGATGCCAGACAAATCACTGAAATTGAACATATGGCAACTCAAGTATCTCAAAATAGCAACCCGGTTTGGCTTGCTAGCAGAGGCCTGTTTGGCTTTGCTCCTTCTTCCAATTCTAAGGGGGTTGGCTGTATTTCGCATAATTGGCATTCAATTTGAAGCTTCAGTTAGGTATCACACCTGGGTTGGAACTGCTATGATATGTTTTGCTACAATACATGGCGCCAGCACTTTGTTTGTCTGGGGGGTCAGCCACCATATACAGCAAGAGTTCTATCTCACTCTCTTCATATTTTTCAAACAGATTTGGAAGTGGCAAAAGACAGGACGTATATACCTTGCTGGGGAGATTGCACTTGTTATTGGGCTAGTTATCTGGGTTACTTCACTTCCCCAAATTAGAAGAAGGAAGTTTGAAATCTTCTACTACACACATCATCTGTATACAGTGTTTCTAGTATTTTTCTTGTTTCATGCTGGGGACAGGCACTTCTATANTGTCTTCCCAGGAATATTCCTTTTTAGCCTTGACAAACTGCTCCGTATCATTCAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAGAATTTTCCCCTGCAAAGCTGTGGAATTAATTCTGCCCAAAGATCCAAAGCTGAAGTATAACCCTACAAGTGTTATATTTTTGAAGATACCAACTATATCTCATCTTCAATGGCATTCTTTCAGTATAGTATCTAGTTCNAAAGCTGATGACAACATTATGTCTGTGATAATTAAATGTCAAGGGCAGTGGACGGATACTCTTTATGACCTGATACATGCTGAACTAAACAAAGGTGCTGATAAGAGGAAGGGTATACCTGTTGCCATTGAAGGACCTTATGGACCTGCTTCATTAGAGTTTTTAAAATATGACAGTTTACTTCTGGTTGCTGGAGGAAGTGGAATAACCCCATTTCTGAGCATTTTGGCAGAAATTGACTCAGCTACCAGCAAAAATAGAGTTCCCTCAAGAATACAACTTGTATATGTCATAAAGAAGGCACAAGACTTTTGCCTGTTCCATTCACTTGCACATCTGTTACTCAACCAATCAACTGAGAAATTTCATTTGAGTCTAAAATTGTTTGTAACCCAAGAAACACAAGCCGNCATGGGAATCATGGAGCTACTGAATGAGTTCTTTAAAGTAAGAACCCTGCAATTGAACAGTGTGTGTTCAAATTATGCAGCATACGGGCCTGAAAGTCCAGCTTGGATGGCTGCCATTGCAGGATTTTGCTCCATCANTTTCCTTATTTTTCTTATCTGTTTCAACCATACCATAATTCCATCTGGAAAGCTTTCCAAATTGTCCAAAGAGAAGACTGCTTCTTGGGCTGTGGATCTACTTCTGATAGCTTCTTTTGTCCTAGCTTTAGCTTGCAGCACCTTGATGGCAATTATCTTGAGATGGATAAGGCTGAAGAAAGGGATTCCATCGATGCCGCAGAAGGAAATTAAACCCCTTGATCTAAGTTCAGCTGAAACTAGGAATGCTCTTGAGGAACATGAAGTTCATTTTGGGGAAAGGCCTAACTTTGAAGATATATTTGGCAAGTTCCGGAATGAAACCTGTGGATCTAATGTTGGANTTATGGTTTGTGGACCTGAGAGCATGAAGGAATCTGTGGCATCTGCATGCCAGCAAGAGTCCGAGTGTTTCAAGTTAGGTGTAAAGAGAACAGAACCTTGCTTCAGTTTCCACTCTCTCAGTTTCACGCTTTAGCAGTCGAAGTTTGGCTGCCCAAGTGCTGATATACAAGTCTGCTGTTGTTTAGTGGTACACCAATGCCTTTTTCATTCNCAAGTTTTCAGATTCCCCTGGTTTGCGTGCTCTATCTGTATCAAGCCATGGATTTTAGTAAGCTTTCTGAGTGCCCACGTGTGCGTATNGTATATATTTTCATGTAATGTAATAATCAGAGCACCCTTTTCCGAAGAATGTAGTTGCGATGTCTCACAAGTCACAAATGTTCNCGTCTGAATGCAATCAAAATCCACCCCCTTTTATCCTCTAATGCGGTTTAAAAGCCTATCATTCACGAATCTTCTTGTTTTAGGAAGAAAAAAAAAACAGTTATCTATAACCAAAAGGAATTTAGTGATTTTTCNTAGCATGCGTGCATATCGCCACAGCCGTGTAAGGTGCATCTATCTATGTGTCATCNTTCATGTATTCAATTTTAAACTGCTTCCAGATATGCAGAATACAAATCCATTCATGCAAAGAAGGACAATGAACTCTAATGGAAAGCAAGTAAATCACGCTTTCAGATGCAAACAAGTGGCAAATCTCCAAACACATACAGTGTTTTTCTAGTAGTAGACTGGAAAGATACTTGTGTTGACTAAAACTACATATAATAGTCGGTGTCTCAAAACTCAGTATTGATCAGGTACAATACAAAGCACACTACATACACAGTAACAACGGACTTGATGGGAAGTGGAAATAATCCAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00972	37555	41239	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000972s00027758.1	PF01794.14	Ferric_reduct	158	291	1.50E-16
Glyur000972s00027758.1	PF08022.7	FAD_binding_8	327	426	2.70E-18
Glyur000972s00027758.1	PF08030.7	NAD_binding_6	433	691	7.20E-21
Glyur000972s00027758.2	PF01794.14	Ferric_reduct	162	284	8.10E-18
Glyur000972s00027758.2	PF08022.7	FAD_binding_8	320	419	2.70E-18
Glyur000972s00027758.2	PF08030.7	NAD_binding_6	426	684	7.10E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.877
SRR1783600	control	24.913
SRR1783602	moderate drought stress	17.034
SRR1811619	moderate drought stress	17.164

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	64.086
DRR006520	Root Summer glycyrrhizin high producing strain	63.387
DRR006521	Root Winter glycyrrhizin high producing strain	5.851
DRR006522	Root Winter glycyrrhizin high producing strain	5.794
DRR006523	Root Summer glycyrrhizin low producing strain	46.672
DRR006524	Root Summer glycyrrhizin low producing strain	46.802
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.226
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.993

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.448
SRR2868004	Drought Stress (root)	39.686
SRR2967015	Control (root)	18.003

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	29.268
SRR9715740	Leaf	27.183
SRR9715741	Leaf	44.675
SRR9715739	Root	22.858
SRR9715742	Root	104.048
SRR9715743	Root	91.408

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.689
SRR8749028	MeJA induced 9h	6.064
SRR8749029	MeJA induced 9h	3.923
SRR8749030	Uninduced	19.020
SRR8749031	Uninduced	8.827
SRR8749032	Uninduced	4.846

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	34.492
SRR8400027	Control - Root	24.440