Gene detail information of Glyur000970s00028360 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28760.2 | 1.00E-62 | Protein of unknown function (DUF3741) |
| NR | KHN48970.1 | 0 | hypothetical protein glysoja_025347 [Glycine soja] |
| trEMBL | tr|K7LZF7|K7LZF7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19200.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00970 | 29640 | 34055 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000970s00028360.1 | PF12552.3 | DUF3741 | 124 | 165 | 7.90E-15 |
| Glyur000970s00028360.1 | PF14309.1 | DUF4378 | 686 | 880 | 1.80E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.965 |
| SRR1783600 | control | 2.890 |
| SRR1783602 | moderate drought stress | 6.140 |
| SRR1811619 | moderate drought stress | 6.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.661 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.669 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.634 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.474 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.946 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.760 |
| SRR2868004 | Drought Stress (root) | 12.073 |
| SRR2967015 | Control (root) | 13.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.273 |
| SRR9715740 | Leaf | 1.055 |
| SRR9715741 | Leaf | 0.726 |
| SRR9715739 | Root | 0.080 |
| SRR9715742 | Root | 2.493 |
| SRR9715743 | Root | 2.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.063 |
| SRR8749028 | MeJA induced 9h | 0.055 |
| SRR8749029 | MeJA induced 9h | 0.150 |
| SRR8749030 | Uninduced | 0.063 |
| SRR8749031 | Uninduced | 0.151 |
| SRR8749032 | Uninduced | 0.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.059 |
| SRR8400027 | Control - Root | 16.025 |