Gene detail information of Glyur000967s00032381 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23160.1 | 0 | Protein of unknown function (DUF668) |
| NR | KEH41144.1 | 0 | plant/T32M21-140 protein [Medicago truncatula] |
| trEMBL | tr|A0A072VGG8|A0A072VGG8_MEDTR | 0 | Plant/T32M21-140 protein {ECO:0000313|EMBL:KEH41144.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00967 | 69884 | 71722 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000967s00032381.1 | PF11961.3 | DUF3475 | 45 | 101 | 7.20E-25 |
| Glyur000967s00032381.1 | PF05003.7 | DUF668 | 442 | 531 | 1.70E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.167 |
| SRR1783600 | control | 4.172 |
| SRR1783602 | moderate drought stress | 3.837 |
| SRR1811619 | moderate drought stress | 3.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.443 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.479 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.024 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.851 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.884 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.828 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.131 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.205 |
| SRR2868004 | Drought Stress (root) | 28.341 |
| SRR2967015 | Control (root) | 25.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.160 |
| SRR9715740 | Leaf | 3.013 |
| SRR9715741 | Leaf | 2.297 |
| SRR9715739 | Root | 5.737 |
| SRR9715742 | Root | 8.163 |
| SRR9715743 | Root | 8.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.475 |
| SRR8749028 | MeJA induced 9h | 19.312 |
| SRR8749029 | MeJA induced 9h | 5.056 |
| SRR8749030 | Uninduced | 7.846 |
| SRR8749031 | Uninduced | 8.569 |
| SRR8749032 | Uninduced | 2.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.026 |
| SRR8400027 | Control - Root | 21.006 |