Gene detail information of Glyur000967s00032377 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14450.1 | 5.00E-08 | |
| NR | KEH41142.1 | 5.87E-33 | hypothetical protein MTR_1g044125 [Medicago truncatula] |
| Swissprot | tr|Q6NN02|Y4445_ARATH | 2.00E-17 | Uncharacterized protein At4g14450, chloroplastic (Precursor) |
| trEMBL | tr|A0A072VH40|A0A072VH40_MEDTR | 2.00E-33 | Uncharacterized protein {ECO:0000313|EMBL:KEH41142.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00967 | 34721 | 35023 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.348 |
| SRR1783600 | control | 32.191 |
| SRR1783602 | moderate drought stress | 38.427 |
| SRR1811619 | moderate drought stress | 38.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.234 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.524 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.666 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.968 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.377 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.647 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.289 |
| SRR2868004 | Drought Stress (root) | 42.366 |
| SRR2967015 | Control (root) | 53.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.836 |
| SRR9715740 | Leaf | 13.243 |
| SRR9715741 | Leaf | 13.717 |
| SRR9715739 | Root | 64.826 |
| SRR9715742 | Root | 49.247 |
| SRR9715743 | Root | 53.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.417 |
| SRR8749028 | MeJA induced 9h | 56.139 |
| SRR8749029 | MeJA induced 9h | 66.386 |
| SRR8749030 | Uninduced | 66.010 |
| SRR8749031 | Uninduced | 72.731 |
| SRR8749032 | Uninduced | 111.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.536 |
| SRR8400027 | Control - Root | 38.697 |