Gene detail information of Glyur000966s00025852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_011080281.1 | 1.59E-22 | PREDICTED: extensin-2-like [Sesamum indicum] |
| trEMBL | tr|G7IUC3|G7IUC3_MEDTR | 3.00E-16 | Transmembrane protein, putative {ECO:0000313|EMBL:AES67688.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00966 | 86100 | 87785 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.328 |
| SRR1783600 | control | 6.571 |
| SRR1783602 | moderate drought stress | 1.596 |
| SRR1811619 | moderate drought stress | 1.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.961 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.973 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.194 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.504 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.578 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 69.951 |
| SRR2868004 | Drought Stress (root) | 72.520 |
| SRR2967015 | Control (root) | 44.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.804 |
| SRR9715740 | Leaf | 1.101 |
| SRR9715741 | Leaf | 1.696 |
| SRR9715739 | Root | 1.375 |
| SRR9715742 | Root | 0.284 |
| SRR9715743 | Root | 0.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.902 |
| SRR8749028 | MeJA induced 9h | 14.010 |
| SRR8749029 | MeJA induced 9h | 11.859 |
| SRR8749030 | Uninduced | 14.546 |
| SRR8749031 | Uninduced | 10.829 |
| SRR8749032 | Uninduced | 7.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.451 |
| SRR8400027 | Control - Root | 17.085 |