Gene detail information of Glyur000965s00031250 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AES87502.2 | 5.39E-13 | animal RPA1 domain protein [Medicago truncatula] |
| trEMBL | tr|G7JIC6|G7JIC6_MEDTR | 2.00E-13 | Animal RPA1 domain protein {ECO:0000313|EMBL:AES87502.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00965 | 5562 | 6771 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.840 |
| SRR1783600 | control | 0.872 |
| SRR1783602 | moderate drought stress | 0.350 |
| SRR1811619 | moderate drought stress | 0.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.112 |
| SRR2868004 | Drought Stress (root) | 0.474 |
| SRR2967015 | Control (root) | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.685 |
| SRR9715740 | Leaf | 3.314 |
| SRR9715741 | Leaf | 2.313 |
| SRR9715739 | Root | 0.959 |
| SRR9715742 | Root | 0.885 |
| SRR9715743 | Root | 0.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.609 |
| SRR8749028 | MeJA induced 9h | 0.382 |
| SRR8749029 | MeJA induced 9h | 0.497 |
| SRR8749030 | Uninduced | 1.014 |
| SRR8749031 | Uninduced | 0.711 |
| SRR8749032 | Uninduced | 1.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.910 |
| SRR8400027 | Control - Root | 3.406 |