Gene detail information of Glyur000964s00027943


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59970.13.00E-41Histone superfamily protein
NRACG30677.18.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold009642919629507+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006334  nucleosome assembly


cellular_component

GO:0000786  nucleosome

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0046982  protein heterodimerization activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000964s00027943.1PF00125.19Histone28942.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.237
SRR1783600control18.112
SRR1783602moderate drought stress10.972
SRR1811619moderate drought stress13.013

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.920
DRR006520Root Summer glycyrrhizin high producing strain29.592
DRR006521Root Winter glycyrrhizin high producing strain7.507
DRR006522Root Winter glycyrrhizin high producing strain4.153
DRR006523Root Summer glycyrrhizin low producing strain18.960
DRR006524Root Summer glycyrrhizin low producing strain23.974
DRR006525Leaf Summer glycyrrhizin high producing strain7.579
DRR006526Leaf Summer glycyrrhizin high producing strain7.792

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)186.813
SRR2868004Drought Stress (root)93.719
SRR2967015Control (root)81.923

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf36.245
SRR9715740Leaf25.317
SRR9715741Leaf23.883
SRR9715739Root103.177
SRR9715742Root35.294
SRR9715743Root43.654

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h137.034
SRR8749028MeJA induced 9h47.450
SRR8749029MeJA induced 9h68.867
SRR8749030Uninduced30.334
SRR8749031Uninduced21.572
SRR8749032Uninduced20.137

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root180.745
SRR8400027Control - Root166.555

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved