Gene detail information of Glyur000964s00027940 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29590.1 | 1.00E-49 | Thioesterase superfamily protein |
| NR | XP_003615571.1 | 1.14E-92 | Acyl-coenzyme A thioesterase [Medicago truncatula] |
| trEMBL | tr|G7KE38|G7KE38_MEDTR | 4.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:AFK44583.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00964 | 16491 | 18657 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000964s00027940.1 | PF03061.17 | 4HBT | 74 | 126 | 2.80E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.058 |
| SRR1783600 | control | 27.198 |
| SRR1783602 | moderate drought stress | 25.337 |
| SRR1811619 | moderate drought stress | 25.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.236 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.999 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.963 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.467 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.494 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.196 |
| SRR2868004 | Drought Stress (root) | 10.242 |
| SRR2967015 | Control (root) | 11.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.122 |
| SRR9715740 | Leaf | 6.282 |
| SRR9715741 | Leaf | 6.800 |
| SRR9715739 | Root | 3.485 |
| SRR9715742 | Root | 5.381 |
| SRR9715743 | Root | 4.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.349 |
| SRR8749028 | MeJA induced 9h | 9.583 |
| SRR8749029 | MeJA induced 9h | 19.108 |
| SRR8749030 | Uninduced | 8.911 |
| SRR8749031 | Uninduced | 5.445 |
| SRR8749032 | Uninduced | 5.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.062 |
| SRR8400027 | Control - Root | 10.445 |