Gene detail information of Glyur000964s00027938 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58920.1 | 1.00E-62 | |
| NR | XP_004490573.1 | 5.98E-100 | PREDICTED: uncharacterized protein LOC101493698 [Cicer arietinum] |
| trEMBL | tr|G7KE40|G7KE40_MEDTR | 1.00E-98 | Uncharacterized protein {ECO:0000313|EMBL:AES98531.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00964 | 9189 | 10703 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.320 |
| SRR1783600 | control | 16.530 |
| SRR1783602 | moderate drought stress | 12.206 |
| SRR1811619 | moderate drought stress | 11.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.751 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.715 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.216 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.439 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.945 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.618 |
| SRR2868004 | Drought Stress (root) | 26.077 |
| SRR2967015 | Control (root) | 23.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.326 |
| SRR9715740 | Leaf | 15.315 |
| SRR9715741 | Leaf | 11.206 |
| SRR9715739 | Root | 43.678 |
| SRR9715742 | Root | 28.931 |
| SRR9715743 | Root | 32.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.153 |
| SRR8749028 | MeJA induced 9h | 9.484 |
| SRR8749029 | MeJA induced 9h | 10.760 |
| SRR8749030 | Uninduced | 7.714 |
| SRR8749031 | Uninduced | 6.080 |
| SRR8749032 | Uninduced | 7.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.462 |
| SRR8400027 | Control - Root | 38.425 |