Gene detail information of Glyur000963s00023045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42330.1 | 2.00E-25 | |
| NR | XP_004500880.1 | 4.05E-93 | PREDICTED: uncharacterized protein LOC101514592 [Cicer arietinum] |
| trEMBL | tr|K7KSJ4|K7KSJ4_SOYBN | 3.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G02060.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00963 | 75619 | 76527 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.373 |
| SRR1783600 | control | 3.299 |
| SRR1783602 | moderate drought stress | 2.341 |
| SRR1811619 | moderate drought stress | 2.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.150 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.811 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.790 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.217 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.216 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.898 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.994 |
| SRR2868004 | Drought Stress (root) | 10.929 |
| SRR2967015 | Control (root) | 12.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.153 |
| SRR9715740 | Leaf | 2.077 |
| SRR9715741 | Leaf | 2.898 |
| SRR9715739 | Root | 2.641 |
| SRR9715742 | Root | 1.943 |
| SRR9715743 | Root | 2.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.952 |
| SRR8749028 | MeJA induced 9h | 17.224 |
| SRR8749029 | MeJA induced 9h | 21.064 |
| SRR8749030 | Uninduced | 0.385 |
| SRR8749031 | Uninduced | 0.315 |
| SRR8749032 | Uninduced | 1.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.826 |
| SRR8400027 | Control - Root | 10.555 |