Gene detail information of Glyur000963s00023041 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63610.1 | 7.00E-121 | |
| NR | NP_001240161.1 | 0 | uncharacterized protein LOC100815202 [Glycine max] |
| trEMBL | tr|C6TGY6|C6TGY6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00963 | 48983 | 52733 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000963s00023041.1 | PF05542.6 | DUF760 | 86 | 168 | 7.80E-25 |
| Glyur000963s00023041.1 | PF05542.6 | DUF760 | 238 | 322 | 2.00E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.612 |
| SRR1783600 | control | 54.661 |
| SRR1783602 | moderate drought stress | 32.486 |
| SRR1811619 | moderate drought stress | 32.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.463 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.783 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.356 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.641 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 60.169 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 60.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.458 |
| SRR2868004 | Drought Stress (root) | 36.220 |
| SRR2967015 | Control (root) | 36.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.323 |
| SRR9715740 | Leaf | 84.115 |
| SRR9715741 | Leaf | 67.576 |
| SRR9715739 | Root | 10.291 |
| SRR9715742 | Root | 20.497 |
| SRR9715743 | Root | 18.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.723 |
| SRR8749028 | MeJA induced 9h | 24.619 |
| SRR8749029 | MeJA induced 9h | 23.413 |
| SRR8749030 | Uninduced | 17.835 |
| SRR8749031 | Uninduced | 12.536 |
| SRR8749032 | Uninduced | 8.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.561 |
| SRR8400027 | Control - Root | 47.936 |