Gene detail information of Glyur000963s00023039 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G42430.1 | 1.00E-177 | |
| NR | XP_003527395.1 | 0 | PREDICTED: uncharacterized protein LOC100788155 [Glycine max] |
| trEMBL | tr|I1K7E2|I1K7E2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G02120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00963 | 31642 | 38514 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.455 |
| SRR1783600 | control | 12.713 |
| SRR1783602 | moderate drought stress | 10.223 |
| SRR1811619 | moderate drought stress | 10.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.582 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.926 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.901 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.719 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.023 |
| SRR2868004 | Drought Stress (root) | 25.472 |
| SRR2967015 | Control (root) | 30.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.221 |
| SRR9715740 | Leaf | 1.988 |
| SRR9715741 | Leaf | 3.306 |
| SRR9715739 | Root | 2.521 |
| SRR9715742 | Root | 8.919 |
| SRR9715743 | Root | 7.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.545 |
| SRR8749028 | MeJA induced 9h | 13.913 |
| SRR8749029 | MeJA induced 9h | 7.756 |
| SRR8749030 | Uninduced | 2.832 |
| SRR8749031 | Uninduced | 3.186 |
| SRR8749032 | Uninduced | 3.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.958 |
| SRR8400027 | Control - Root | 33.230 |