Gene detail information of Glyur000961s00028338 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70140.1 | 2.00E-118 | formin 8 |
| NR | XP_004504509.1 | 0 | PREDICTED: formin-like protein 4-like, partial [Cicer arietinum] |
| Swissprot | tr|O48682|FH4_ARATH | 5.00E-164 | Formin-like protein 4 (Precursor) |
| trEMBL | tr|G7K5M3|G7K5M3_MEDTR | 0 | Formin-like protein {ECO:0000256|RuleBase:RU361260} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00961 | 88217 | 91003 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000961s00028338.1 | PF02181.18 | FH2 | 398 | 776 | 2.10E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.510 |
| SRR1783600 | control | 0.465 |
| SRR1783602 | moderate drought stress | 0.277 |
| SRR1811619 | moderate drought stress | 0.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.045 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.044 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.372 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.355 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.038 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.077 |
| SRR2868004 | Drought Stress (root) | 2.019 |
| SRR2967015 | Control (root) | 1.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.013 |
| SRR9715740 | Leaf | 11.285 |
| SRR9715741 | Leaf | 1.319 |
| SRR9715739 | Root | 1.322 |
| SRR9715742 | Root | 0.510 |
| SRR9715743 | Root | 0.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.938 |
| SRR8749028 | MeJA induced 9h | 3.160 |
| SRR8749029 | MeJA induced 9h | 0.897 |
| SRR8749030 | Uninduced | 17.977 |
| SRR8749031 | Uninduced | 8.708 |
| SRR8749032 | Uninduced | 1.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.921 |
| SRR8400027 | Control - Root | 1.382 |