Gene detail information of Glyur000959s00024518 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16850.1 | 9.00E-29 | |
| NR | XP_004497348.1 | 8.86E-110 | PREDICTED: uncharacterized protein LOC101508754 [Cicer arietinum] |
| trEMBL | tr|G7IF15|G7IF15_MEDTR | 7.00E-106 | Transmembrane protein, putative {ECO:0000313|EMBL:AES63031.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00959 | 101475 | 102419 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.091 |
| SRR1783600 | control | 11.183 |
| SRR1783602 | moderate drought stress | 10.639 |
| SRR1811619 | moderate drought stress | 10.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.679 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.139 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.990 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.735 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.392 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.115 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.571 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.504 |
| SRR2868004 | Drought Stress (root) | 36.934 |
| SRR2967015 | Control (root) | 39.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.390 |
| SRR9715740 | Leaf | 3.197 |
| SRR9715741 | Leaf | 5.509 |
| SRR9715739 | Root | 39.837 |
| SRR9715742 | Root | 24.703 |
| SRR9715743 | Root | 24.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.928 |
| SRR8749028 | MeJA induced 9h | 1.658 |
| SRR8749029 | MeJA induced 9h | 2.538 |
| SRR8749030 | Uninduced | 1.744 |
| SRR8749031 | Uninduced | 0.294 |
| SRR8749032 | Uninduced | 0.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.066 |
| SRR8400027 | Control - Root | 27.199 |