Gene detail information of Glyur000959s00024516 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13000.1 | 7.00E-85 | glucan synthase-like 12 |
| NR | XP_003592817.1 | 5.51E-108 | Callose synthase [Medicago truncatula] |
| Swissprot | tr|Q9LXT9|CALS3_ARATH | 2.00E-94 | Callose synthase 3 |
| trEMBL | tr|S8C9T1|S8C9T1_9LAMI | 6.00E-108 | Uncharacterized protein {ECO:0000313|EMBL:EPS63560.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00959 | 82501 | 87053 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.114 |
| SRR1783600 | control | 3.992 |
| SRR1783602 | moderate drought stress | 8.965 |
| SRR1811619 | moderate drought stress | 8.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.117 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.088 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.473 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.801 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.457 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.084 |
| SRR2868004 | Drought Stress (root) | 10.995 |
| SRR2967015 | Control (root) | 9.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.598 |
| SRR9715740 | Leaf | 4.094 |
| SRR9715741 | Leaf | 5.706 |
| SRR9715739 | Root | 0.272 |
| SRR9715742 | Root | 1.898 |
| SRR9715743 | Root | 1.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.212 |
| SRR8749028 | MeJA induced 9h | 6.553 |
| SRR8749029 | MeJA induced 9h | 2.480 |
| SRR8749030 | Uninduced | 2.954 |
| SRR8749031 | Uninduced | 3.012 |
| SRR8749032 | Uninduced | 1.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.446 |
| SRR8400027 | Control - Root | 9.195 |