Gene detail information of Glyur000959s00024511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12345.1 | 8.00E-31 | |
| NR | XP_003522767.1 | 5.70E-84 | PREDICTED: uncharacterized protein LOC100798145 [Glycine max] |
| trEMBL | tr|I1JV77|I1JV77_SOYBN | 2.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00959 | 52826 | 53377 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.593 |
| SRR1783600 | control | 4.354 |
| SRR1783602 | moderate drought stress | 6.796 |
| SRR1811619 | moderate drought stress | 5.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.763 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.899 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.194 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 84.039 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 90.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.671 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.561 |
| SRR8749028 | MeJA induced 9h | 0.527 |
| SRR8749029 | MeJA induced 9h | 0.334 |
| SRR8749030 | Uninduced | 0.342 |
| SRR8749031 | Uninduced | 0.429 |
| SRR8749032 | Uninduced | 1.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.014 |
| SRR8400027 | Control - Root | 0.000 |