Gene detail information of Glyur000959s00024507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDO42781.1 | 1.40E-08 | hypothetical protein CISIN_1g035372mg [Citrus sinensis] |
| trEMBL | tr|J3M3F9|J3M3F9_ORYBR | 3.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G11330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00959 | 47343 | 48253 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.320 |
| SRR1783600 | control | 1.437 |
| SRR1783602 | moderate drought stress | 1.695 |
| SRR1811619 | moderate drought stress | 1.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.389 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.314 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.222 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.130 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.264 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.118 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.242 |
| SRR2868004 | Drought Stress (root) | 1.830 |
| SRR2967015 | Control (root) | 4.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.938 |
| SRR9715740 | Leaf | 0.812 |
| SRR9715741 | Leaf | 0.363 |
| SRR9715739 | Root | 3.971 |
| SRR9715742 | Root | 1.070 |
| SRR9715743 | Root | 2.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.588 |
| SRR8749028 | MeJA induced 9h | 0.481 |
| SRR8749029 | MeJA induced 9h | 0.087 |
| SRR8749030 | Uninduced | 0.471 |
| SRR8749031 | Uninduced | 0.597 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.586 |
| SRR8400027 | Control - Root | 5.706 |