Gene detail information of Glyur000959s00024503.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05340.1 | 1.00E-93 | Peroxidase superfamily protein |
| NR | XP_004497330.1 | 1.15E-179 | PREDICTED: cationic peroxidase 1-like [Cicer arietinum] |
| Swissprot | tr|P22195|PER1_ARAHY | 6.00E-151 | Cationic peroxidase 1 (Precursor) |
| trEMBL | tr|I1NJ70|I1NJ70_SOYBN | 1.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00959 | 17827 | 19441 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000959s00024503.1 | PF00141.18 | peroxidase | 47 | 284 | 4.40E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.977 |
| SRR1783600 | control | 0.873 |
| SRR1783602 | moderate drought stress | 1.091 |
| SRR1811619 | moderate drought stress | 0.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 106.434 |
| SRR2868004 | Drought Stress (root) | 98.557 |
| SRR2967015 | Control (root) | 78.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.337 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.043 |
| SRR9715739 | Root | 1.594 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.254 |
| SRR8749028 | MeJA induced 9h | 0.739 |
| SRR8749029 | MeJA induced 9h | 2.186 |
| SRR8749030 | Uninduced | 1.131 |
| SRR8749031 | Uninduced | 0.334 |
| SRR8749032 | Uninduced | 0.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.009 |
| SRR8400027 | Control - Root | 6.121 |