Gene detail

Gene detail information of Glyur000958s00027844.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G17850.1	0	Protein kinase superfamily protein
NR	XP_004512760.1	0	PREDICTED: uncharacterized protein LOC101496611 isoform X1 [Cicer arietinum]
COG	YP_004582129.1	4.00E-21	serine/threonine protein kinase [Frankia symbiont of Datisca glomerata]
Swissprot	tr\|F4J6F6\|IREH1_ARATH	0	Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBL	tr\|K7LEH0\|K7LEH0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G30441.1}

Sequence

Transcript Sequence

>Glyur000958s00027844.1
ATGGTCTTCAAGGGAAGATTCTTCTCTTCGAAGAAATCAGATACTTCTAGCCCCCCCCCCCCTTCCAACAGTCCTCGATCACTCTCCTCTAACTCTCCTTCCCCCCCCCACAAGAAAAAGCCCAAACCAGCCTCCAATCAAACCCTAACCTCCACCGCCGGCGGCAGCGGCGGCGGTGGAGGTGGAGGATTCGCCGCCGCCAACTGCCGCCAGACGCAAGTCAAGGACGGGACTAAGAAGAAGGACGCCAAGGGGAAAGAGACTCCGACGGTGTCGAAGAAGTTGACTCCGGCGGCGGAGTTGAAGGAGAAGGAATCGCCGTCGCCGTCGACGTCGTCGGTTTCGCNGATTCTGGCGTCGTCGCTTGGGTTGAATAGGATAAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTTGGCTTCAGGGGAGATAAGGGAGGAGGAGCGGCGGCGGCGCTCGGCGCAAGTAACCTGTCGAGGCCTGGCGGTGGTGGTGGGAAGAAGAAGGAGGTGGTGAACCAGAATAGAGTTGGGTTTCAGGAGGGTTTGGTTGTTGACAATGGGAGTAGTTCCGATGGCATGTCGACCGGGAGTGGCGGTGCGCCGTCGAGGGAACAGAGCCAGCAGGCATCATCACGGACTCAGACCGGAGACTTAAGAAGTGCAGATGTCTGCACTCCAGAGACAGCATATGATTTTGAAAATCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCCAGAAAGAGGATTCCTGCGGATATCAAGAGTTTTTCNCATGAGCTGAATTCCAAAGGTGTCCGGCCTTTCCCATTTTGGAAGTCTCGAAGGTTAAATAACGTTGAGGAGGTCTTGGTTGTTATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTAAACTCTGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGACTGGCAAGAGACAATTGAGGACCCCCCCCCTTTGGCCAGGCGCTGTGCTATGACTTCAGCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGATTTGGATGATAGGCGTCAACCCCCCCCTCCAGGGACACTAAAGCAGCTTCACACTCGAATGCTTTTCCCCCCCCCAAGGTGCACTAGGTTGTTGCAATTCCACAAGGAAAGTGGTCCCCCCCCGGATGAACATGTTTTCAATCTTCGTCAATCTAGAGTCTTGCATTCTGCTGAAAAAAGTATTCCTCCTCGTATGGGAAAGGATACCAAACCCCCCCCTGCTGCAAAGACCTCGAAGGCTTCAAAAAAAGCTTATAGCCAAGAGCAAAGTATCTTGAATTGGAAGAAAGATGTTATGCGACCGGAACCCCCCCCGCCTCCTGCTGATGATGACTCTTCAAAAAACTCTGAGTCTCCTGGCAGGAATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCAACACCCCCCCCCCCAAAAGAAACTGCTCAGTTGAAGGACCAAATTTATGCGCCCCCCCCACCTTTGAAGACATCAAATAACAAGAGATCAACTTCTGATGTAGATCTCTCTGCTGCTAAGCCGTCTGAGCTTCTTCCTTTCAAAGATCCCCCCCCCCATGCTTCCAAGCACCAACACAAAGTTTCCTGGGGCTACCCCCCCCCTCAGCAGAATAATAGTGAGGAGAGTTCAATAATTTGTCGACCCCCCCCAGAGGAAGTACCTACTTCACATGTTGAAGATCATTCAAAGCCCCCCCCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGTCTTTGTAGAATTGCTGACACGCTAGAAAAGATGATCGAGTCATATACTCAGAAAGACACCCAACAAATAGTCGGAAGTCCTGATGTTGCACCCCCCCCAAATTCAAGTATGACTGAAGAATCTGATGTTCTTTCCCCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGATTGTTTCCCTGAAACTGATAATTCTGTTTTTATGGATGAACTAAAGGGATTGCCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGTCAGATTGACTTACTCTTGGCAGGGAAGAATGAATGAACTTGCTCCCCCCCCGCGATGTGTGGCAAATGCTCCTCTGGATGATGATCGCACACCCCCCCCTTTATTATCTTGTCTTGATGACTTGAGGGTTGTCGTAGAACCCCCCCCATTTGATGCACTTACTGTGGAGACCTTTGGAACACGCATCCCCCCCCCTATACGTGGTCGCCATAACATCATGGAGCCATTGGCATGGCAGCTGTCATGGTCCCGCCTTTGTGAAATAGAAATACCAAGGCATTTCATGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATATAGAGAGCCCTGTACCCCCCCCTGACGTTCTCTTGGAAGATGATGTGGTTCGCAGCTTGAGACCCCCCCCGATTCATTCTTCAAGGGATCGTACCTCAATTGATGACTTTCCCCCCCCAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGCCCCCCCCGAGGACAACTGGTGATCTTTTTGCAATTAAGGTTCTCAAGAAGGCAGATATGACCCCCCCCAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAACCCCCCCCCGGAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACATGTCGCCCCCCCCTGTATCTTGTCATGGAGTATCTGAATGGTGGCGACTTGTACCCCCCCCTAAGGAATTTAGGTTGTCTTGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTACGTCCCCCCCCTCGTGACTTGAAGCCTGACAATTTATTGATTGCACACGATCCCCCCCCCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGACCAGCAGTGAGTGGGACATCCCTACTTGGGGAAGATGAATCTAACGTATTTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCTGCTGTGGGAACACCTGATTACTTAGCTCCAGAGATACTTNTGGGAACTGGACATGGGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTCAATCGTAAGATACCTTGGCCTGGAGTTCCTGAAGAAATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGAGCCAGAGGGGCATCAGAGGTGAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACGCTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCGGAGAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCATTGTATATCCGGCAAGTGATTTTGAAGATTCCAGTGATGCTGATAGCTTAAGTGGTAGCAGTAGTTGCTTAAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTATAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGACCCGCCAACAAATTCTAGCTCATAGCTGTCTCATCTTCTGCCAAAGTCCCCAATTCAGTTTTCGACCTTATAATGCAAGCAATTTGGGAGGCATAACAACCTTTGTTGTTTGTATACCTTTGTACATAAATTTAGAGGCTCAAAGTGGTTCAGGATGTGTACTCTTTGCTTATTAGGTTGCAGGACAACAGTGGTGGTGGGGTTTCAATCTTTCGGTTGATTTGTGTATGAATTGAGAACTGTAAATTTAAAGAATGCATATTCACAGTTGCTCACATTGTTCTGTGGTGTACTTTTCCTGAATATTCTAGCAATGAGAATACATCCCATTTTGTTCAGGACACTGTAACATTATTTATTTAC

Protein Sequence

>Glyur000958s00027844.1
MVFKGRFFSSKKSDTSSPPPPSNSPRSLSSNSPSPPHKKKPKPASNQTLTSTAGGSGGGGGGGFAAANCRQTQVKDGTKKKDAKGKETPTVSKKLTPAAELKEKESPSPSTSSVSXILASSLGLNRIKTRSGPLPQESFFGFRGDKGGGAAAALGASNLSRPGGGGGKKKEVVNQNRVGFQEGLVVDNGSSSDGMSTGSGGAPSREQSQQASSRTQTGDLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRIPADIKSFSHELNSKGVRPFPFWKSRRLNNVEEVLVVIRAKFDKEKEEVNSELAIFAADLVGILEKNADTHPDWQETIEDPPPLARRCAMTSAGEFWLQCEGIVQDLDDRRQPPPPGTLKQLHTRMLFPPPRCTRLLQFHKESGPPPDEHVFNLRQSRVLHSAEKSIPPRMGKDTKPPPAAKTSKASKKAYSQEQSILNWKKDVMRPEPPPPPADDDSSKNSESPGRNRMASWKKFPSPTPPPPKETAQLKDQIYAPPPPLKTSNNKRSTSDVDLSAAKPSELLPFKDPPPHASKHQHKVSWGYPPPQQNNSEESSIICRPPPEEVPTSHVEDHSKPPPVADRCDQKGLSVNERLCRIADTLEKMIESYTQKDTQQIVGSPDVAPPPNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPETDNSVFMDELKGLPLISCKTRFGPKSDQVRLTYSWQGRMNELAPPPRCVANAPLDDDRTPPPLLSCLDDLRVVVEPPPFDALTVETFGTRIPPPIRGRHNIMEPLAWQLSWSRLCEIEIPRHFMEKYLQLTEMVDVEKIDIESPVPPPDVLLEDDVVRSLRPPPIHSSRDRTSIDDFPPPKPISRGAFGRVFLPPPRTTGDLFAIKVLKKADMTPPNAVESILAERDILTPPRNPFVVRFFYSFTCRPPLYLVMEYLNGGDLYPPLRNLGCLDEEVARVYIAEVVLALEYLHSLRPPPRDLKPDNLLIAHDPPPKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDESNVFTSEDQRERRKKRSAVGTPDYLAPEILXGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPGVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGIVYPASDFEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSIISPLRISPSLHQSTMISPRDGKMTRQQILAHSCLIFCQSPQFSFRPYNASNLGGITTFVVCIPLYINLEAQSGSGCVLFAY

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00958	36831	49027	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000958s00027844.1	PF00069.20	Pkinase	859	1143	1.20E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.976
SRR1783600	control	11.093
SRR1783602	moderate drought stress	11.361
SRR1811619	moderate drought stress	11.293

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.097
DRR006520	Root Summer glycyrrhizin high producing strain	13.590
DRR006521	Root Winter glycyrrhizin high producing strain	13.914
DRR006522	Root Winter glycyrrhizin high producing strain	13.276
DRR006523	Root Summer glycyrrhizin low producing strain	15.288
DRR006524	Root Summer glycyrrhizin low producing strain	15.311
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.701
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.790

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.798
SRR2868004	Drought Stress (root)	31.814
SRR2967015	Control (root)	32.240

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.393
SRR9715740	Leaf	16.161
SRR9715741	Leaf	20.430
SRR9715739	Root	7.899
SRR9715742	Root	21.194
SRR9715743	Root	17.248

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.903
SRR8749028	MeJA induced 9h	19.057
SRR8749029	MeJA induced 9h	19.927
SRR8749030	Uninduced	23.303
SRR8749031	Uninduced	28.545
SRR8749032	Uninduced	25.560

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.372
SRR8400027	Control - Root	25.571