Gene detail information of Glyur000957s00027267.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41460.1 | 0 | Protein of unknown function (DUF604) |
| NR | KHN26942.1 | 0 | hypothetical protein glysoja_031019 [Glycine soja] |
| trEMBL | tr|I1MKT6|I1MKT6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00957 | 35982 | 39927 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000957s00027267.1 | PF04646.7 | DUF604 | 257 | 509 | 4.80E-120 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.929 |
| SRR1783600 | control | 63.589 |
| SRR1783602 | moderate drought stress | 34.412 |
| SRR1811619 | moderate drought stress | 34.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.968 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.435 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.991 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.036 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.229 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.366 |
| SRR2868004 | Drought Stress (root) | 27.782 |
| SRR2967015 | Control (root) | 25.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.189 |
| SRR9715740 | Leaf | 14.723 |
| SRR9715741 | Leaf | 11.482 |
| SRR9715739 | Root | 53.669 |
| SRR9715742 | Root | 107.951 |
| SRR9715743 | Root | 94.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 86.747 |
| SRR8749028 | MeJA induced 9h | 84.173 |
| SRR8749029 | MeJA induced 9h | 75.266 |
| SRR8749030 | Uninduced | 49.337 |
| SRR8749031 | Uninduced | 27.108 |
| SRR8749032 | Uninduced | 31.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.212 |
| SRR8400027 | Control - Root | 63.731 |