Gene detail information of Glyur000954s00026544 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24460.1 | 1.00E-141 | |
| NR | KHN24108.1 | 0 | hypothetical protein glysoja_025281 [Glycine soja] |
| trEMBL | tr|K7MPC2|K7MPC2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01470.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00954 | 84419 | 92782 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.501 |
| SRR1783600 | control | 9.498 |
| SRR1783602 | moderate drought stress | 8.700 |
| SRR1811619 | moderate drought stress | 8.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.367 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.824 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.437 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.947 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.525 |
| SRR2868004 | Drought Stress (root) | 25.197 |
| SRR2967015 | Control (root) | 26.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.111 |
| SRR9715740 | Leaf | 13.072 |
| SRR9715741 | Leaf | 16.104 |
| SRR9715739 | Root | 1.030 |
| SRR9715742 | Root | 5.373 |
| SRR9715743 | Root | 4.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.039 |
| SRR8749028 | MeJA induced 9h | 18.447 |
| SRR8749029 | MeJA induced 9h | 5.309 |
| SRR8749030 | Uninduced | 7.773 |
| SRR8749031 | Uninduced | 6.930 |
| SRR8749032 | Uninduced | 4.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.940 |
| SRR8400027 | Control - Root | 20.510 |