Gene detail information of Glyur000952s00025642 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56880.1 | 7.00E-11 | |
| NR | KEH32525.1 | 1.81E-29 | hypothetical protein MTR_4g126310 [Medicago truncatula] |
| trEMBL | tr|A0A072V309|A0A072V309_MEDTR | 7.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:KEH32525.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00952 | 100247 | 100609 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.015 |
| SRR1783600 | control | 3.314 |
| SRR1783602 | moderate drought stress | 2.698 |
| SRR1811619 | moderate drought stress | 2.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.030 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.600 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.062 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.857 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.600 |
| SRR2868004 | Drought Stress (root) | 0.618 |
| SRR2967015 | Control (root) | 0.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.092 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.930 |
| SRR9715742 | Root | 0.184 |
| SRR9715743 | Root | 0.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.452 |
| SRR8749028 | MeJA induced 9h | 5.115 |
| SRR8749029 | MeJA induced 9h | 4.247 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.057 |
| SRR8400027 | Control - Root | 4.982 |