Gene detail

Gene detail information of Glyur000950s00029455

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G05200.1	7.00E-36	cysteine-rich RLK (RECEPTOR-like protein kinase) 25
NR	XP_007140018.1	1.62E-153	hypothetical protein PHAVU_008G077300g [Phaseolus vulgaris]
Swissprot	tr\|Q9M0X5\|CRK25_ARATH	1.00E-39	Cysteine-rich receptor-like protein kinase 25 (Precursor)
trEMBL	tr\|V7B274\|V7B274_PHAVU	6.00E-154	Uncharacterized protein {ECO:0000313\|EMBL:ESW12012.1}

Sequence

Transcript Sequence

>Glyur000950s00029455.1
ATGGCTTGGAATTCCTTCAACTTGAAGCCTATCTGCTTCTTTATCCTTGTTAGCTTCTTCAACTTTTTGTCAACTACTAAAGCGCAGGATCCTTTTCTTTTTTGTTCAACCGACAGAACCACAGCCAGCAGCGCCTTTCAATCGAACCTTAACACCCTCTTCTCTTCCTTAAATTCAGCCGCCACTACCACCAACAACAATGGATTCTTCAATGACACAGTTTCCGGAAGAAATAGAAACCTCTCCGACACTGTCTATGGGCTATTCATGTGCAGGGGAGATGTGCCCACTCAGCTATGTGGACAGTGCGTGGGAAACGCCACTAGGAAACTATCCTCTGATTCAGACTCAGGGTGTTCCTCATCCAAACAGGCCGTGATCTGGTACGACGAGTGTATGGTTCGGTATTCCAACACCTCTTTCTTTTCCACCGTGGAAACAAGCCCAACAATAGCGGTTTCGAGTCTCGCCAATATCTCTAACCCAGCAAGCTTCATGCCTTTGTTGTTAGACTTCATGAACCAAACCGCAGACGAGGCAACCAACTCTCTTACAGATGACAGAAGTTGCCTTGCCCGTGCAATCGAGAATCTTCCAACGTGCTGCAAAGGAAGCCAAGGAGCGAGGGTCCTACTTCCCAGCTGTAACGTTAGATATGAGTTGTACCCTTTCTATCGTGTTCCTACTTTGCTTGCAGGAGGGCTTGTTCCCGAAACAAAGTATCCACAGAAAGATTCAAAATATTCAGAAGATCCAGGGTATCTTTCACACAACTGCTCAATCAACAATGGAGAATTTACCACTACCGATAGTGCTTTCCAATTAAACCTCAGAAATCTTCTCTCTGACTTGTCTTCCAACGCCACTGACGGCACAAAATCCTTCAAGCAGGACAATGCAGGAAGCGTGTATGGCCTCTTCTTGTGTCGTGACGACATTCCTNCTCACCTTTGTGGAAGTTGCGTCGAAAACGCAACGCAAAAATTAGCATCTGAGTGTGGCTCGTCGTGGGAGGGGATAATTTGGTACAATCACTGCTTTCTTCGTTATTCCAATCAATCCTTCTCTTCTAGTGTGGACACAAGTCCCATATTCAACACGCTGAATATCACCAACACCTCGGNAGTCAAGGGTCAATACCCTTATGCGTTATCCAATGCCTTGGCTGAAATGGCAAATCGAACGGGAGACAGTGTTGGGAGATATCAAACGGAATCGTTGAAACTGAATGAGGACCAANCCTTTTACGATCTACAGACGCCGCCCATGGCAGCTTCTCCTAATTCCCCTACAGGCAGGTATGAATTGTACCCTTTCTACCGCGTCTCTACTTTGTTTGCAGGAGGACTCGTTNCCGAAACAGAGTATGCAAAAAAGGATTCAGAATATTCAGAAGATCCAGGATATCTTTCACACAATTGCACAAACAGCAACGACGAATTCGCCACTATCAATAGTACTTCTCTTTTCTACTTAAACCTCGGGATACTTCTAACTAACTTGGCTTCCAACGCCACCGACGGTAAAATATCCTTCAATCTGCAAAACAGTTCTGGAATTGTGTATGGACTCTTCTTGTGTCGTGATGACATTCCTCCTCACCTTTGTGGAGATTGCGTCCAAAATGCGACCATAGAATTAGCTTACGAGTGTCGCTCGTCGCAACAGGCGGTAATTTGGTACAATCACTGTTTTGTTCGCTATTCGAACCAATCCTTCTTCTCCACGATGGACACAAGTCCTAGATATGTGATGTTGAATATCACCAACACCTCNGAAGTCAACGGTCAATACACTTATGCGGTATCCAATGCCTTGGCTGAAATGGCGAACCGGACGGGAGACAGTGTTNGGAGATATCAAACGGAATCGTTGAAATTGAATGAGGACCAAACCGTTTTTATCCTTGCTCAGTGCACGCCTGATCTATCTAGCCGTGATTGTGGCGGTTGTTTGATTGATGTGATTGGATCAGCAATTCCATGGTCTCACTTGGGAAGCGTCGGTGGAAGAGTGCTATATCCTAGCTGCAATTTGAGGTTTGAGTTGTTCCCATTCTACAACCTATTAGATGCAGCTCCTGCTCCTCCTTCACCTAGTACAGGAACAACAAAGGATCGGTCACGAACTATTATCTTAGTTGTTGTCTCCATTGTTGTTTCGGTGATAGTTTTCTCTTTCGGCTACTATTTGATACGAAGAAAAGTTTGGAAACAGTGGAGGGACCAAACACCATTAAACATAGTGGACCCAAAATTGAANGAAAATTATTCTAAAGTTGAAGTTATTAAGTGCATTCAAATTGGTTTATTATGTGTTCAAGAAAACCCAGATGCTAGACCTACAATGGTGACACTTGTTTCATATCTTAGTAGTCACTCAATCGAATTGCCATCTCCTGAGAAACCGGCCTTTTTCTTAGAAGGTAGAATGGACCAACATATAATAGGATTTGAATCAAGTTCCAGCCAATCTGCCAATGGATCCATACCAGTACTCTCTAGCAATAGAATGTCTATAAAAATCTTCGAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00950	68487	74635	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000950s00029455.1	PF01657.12	Stress-antifung	34	141	4.60E-23
Glyur000950s00029455.1	PF01657.12	Stress-antifung	188	224	1.10E-07
Glyur000950s00029455.1	PF01657.12	Stress-antifung	257	355	1.30E-23
Glyur000950s00029455.1	PF01657.12	Stress-antifung	472	573	3.10E-20
Glyur000950s00029455.1	PF01657.12	Stress-antifung	593	684	2.20E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.448
SRR1783600	control	4.329
SRR1783602	moderate drought stress	5.444
SRR1811619	moderate drought stress	5.538

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.085
DRR006520	Root Summer glycyrrhizin high producing strain	0.084
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.189
DRR006524	Root Summer glycyrrhizin low producing strain	0.138
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.049
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.019

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.183
SRR2868004	Drought Stress (root)	12.488
SRR2967015	Control (root)	15.258

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.027
SRR9715740	Leaf	0.064
SRR9715741	Leaf	0.110
SRR9715739	Root	0.893
SRR9715742	Root	2.082
SRR9715743	Root	2.144

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.697
SRR8749028	MeJA induced 9h	1.442
SRR8749029	MeJA induced 9h	0.365
SRR8749030	Uninduced	3.935
SRR8749031	Uninduced	2.534
SRR8749032	Uninduced	0.973

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.336
SRR8400027	Control - Root	9.135