Gene detail information of Glyur000950s00029447 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60800.1 | 3.00E-102 | DHHC-type zinc finger family protein |
| NR | XP_006587892.1 | 1.65E-175 | PREDICTED: probable protein S-acyltransferase 14-like [Glycine max] |
| Swissprot | tr|Q8VYP5|ZDH14_ARATH | 2.00E-153 | Probable protein S-acyltransferase 14 |
| trEMBL | tr|I1L6V6|I1L6V6_SOYBN | 6.00E-176 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00950 | 11444 | 15166 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000950s00029447.1 | PF01529.15 | zf-DHHC | 75 | 242 | 2.50E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.406 |
| SRR1783600 | control | 3.551 |
| SRR1783602 | moderate drought stress | 5.523 |
| SRR1811619 | moderate drought stress | 5.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.510 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.056 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.510 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.865 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.794 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.847 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.843 |
| SRR2868004 | Drought Stress (root) | 51.339 |
| SRR2967015 | Control (root) | 37.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.765 |
| SRR9715740 | Leaf | 9.818 |
| SRR9715741 | Leaf | 12.139 |
| SRR9715739 | Root | 2.810 |
| SRR9715742 | Root | 3.297 |
| SRR9715743 | Root | 2.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.626 |
| SRR8749028 | MeJA induced 9h | 55.127 |
| SRR8749029 | MeJA induced 9h | 43.678 |
| SRR8749030 | Uninduced | 48.512 |
| SRR8749031 | Uninduced | 46.087 |
| SRR8749032 | Uninduced | 52.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.665 |
| SRR8400027 | Control - Root | 17.352 |