Gene detail information of Glyur000949s00028895 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30845.1 | 2.00E-25 | |
| NR | AFK43420.1 | 1.09E-64 | unknown [Lotus japonicus] |
| trEMBL | tr|I3ST28|I3ST28_LOTJA | 4.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:AFK43420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00949 | 77038 | 78387 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000949s00028895.1 | PF00892.15 | EamA | 30 | 109 | 1.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.144 |
| SRR1783600 | control | 5.110 |
| SRR1783602 | moderate drought stress | 8.057 |
| SRR1811619 | moderate drought stress | 7.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.497 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.771 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.410 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.467 |
| SRR2868004 | Drought Stress (root) | 8.710 |
| SRR2967015 | Control (root) | 8.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.876 |
| SRR9715740 | Leaf | 7.176 |
| SRR9715741 | Leaf | 11.372 |
| SRR9715739 | Root | 5.232 |
| SRR9715742 | Root | 7.001 |
| SRR9715743 | Root | 5.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.694 |
| SRR8749028 | MeJA induced 9h | 3.641 |
| SRR8749029 | MeJA induced 9h | 8.742 |
| SRR8749030 | Uninduced | 3.957 |
| SRR8749031 | Uninduced | 4.202 |
| SRR8749032 | Uninduced | 4.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.357 |
| SRR8400027 | Control - Root | 13.310 |