Gene detail information of Glyur000949s00028888 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32270.1 | 2.00E-05 | Ubiquitin-like superfamily protein |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00949 | 26136 | 27104 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.659 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.070 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.936 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.008 |
| SRR2868004 | Drought Stress (root) | 6.531 |
| SRR2967015 | Control (root) | 11.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.213 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.697 |
| SRR8749028 | MeJA induced 9h | 3.000 |
| SRR8749029 | MeJA induced 9h | 7.008 |
| SRR8749030 | Uninduced | 2.631 |
| SRR8749031 | Uninduced | 2.277 |
| SRR8749032 | Uninduced | 4.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |