Gene detail information of Glyur000947s00021201 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50260.1 | 5.00E-126 | Cysteine proteinases superfamily protein |
| NR | NP_001237199.1 | 0 | cysteine proteinase precursor [Glycine max] |
| COG | YP_006415684.1 | 7.00E-14 | cysteine protease [Thiocystis violascens DSM 198] |
| Swissprot | tr|P25803|CYSEP_PHAVU | 0 | Vignain (Precursor) |
| trEMBL | tr|I1KC88|I1KC88_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G18390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00947 | 98534 | 100677 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000947s00021201.1 | PF08246.7 | Inhibitor_I29 | 40 | 95 | 2.60E-12 |
| Glyur000947s00021201.1 | PF00112.18 | Peptidase_C1 | 138 | 262 | 1.50E-42 |
| Glyur000947s00021201.1 | PF00112.18 | Peptidase_C1 | 263 | 299 | 3.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.151 |
| SRR1783600 | control | 8.050 |
| SRR1783602 | moderate drought stress | 2.843 |
| SRR1811619 | moderate drought stress | 3.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.970 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.688 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.318 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.816 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 78.108 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 74.878 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.865 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 89.303 |
| SRR2868004 | Drought Stress (root) | 55.463 |
| SRR2967015 | Control (root) | 65.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.711 |
| SRR9715740 | Leaf | 0.891 |
| SRR9715741 | Leaf | 2.040 |
| SRR9715739 | Root | 1.282 |
| SRR9715742 | Root | 41.669 |
| SRR9715743 | Root | 36.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.106 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.228 |
| SRR8400027 | Control - Root | 30.735 |