Gene detail

Gene detail information of Glyur000947s00021180.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26310.1	1.00E-109	cytochrome P450, family 71, subfamily B, polypeptide 35
NR	XP_004501854.1	0	PREDICTED: cytochrome P450 71A1-like [Cicer arietinum]
COG	YP_004303682.1	7.00E-33	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|P24465\|C71A1_PERAE	3.00E-175	Cytochrome P450 71A1
trEMBL	tr\|G7J474\|G7J474_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES71399.2}

Sequence

Transcript Sequence

>Glyur000947s00021180.1
AAAATGTGCATTTTTTCATAGCAAAAGAAGCTGTAGTAGAAAGCATATTACATTTATGTACTTTTATAGTAATAAAAAAAAAAAGATGGCAATAATCTACTAAGAATAGTGAGCATGCCAAGATGGTAGATAAAAATGGATTGTTTTCATGAGGAGGATCTGATATGGTTAAAAGTACTCAACACACACTAGTAGCACAATCTTGCACTTTGCGAACTGCACTCCCCTCAGTTTATCAAATGGCTCTGCTCCAATGGCTAAAGGAAGGCTATACACCATTCTTGCTCTTTATATTCATTTTCATGGCTCTATCAATGAAACTTCTCTTTATAGACAAGTCAAGAAAGAGAAGATCCAATCTACCTCCNGGTCCTCCTATCATACCCTTCATTGGCAACCTCCACCACCTTGGCACCATGCCCCACCTATCTCTACAAGCCCTTGCAAAGAAGTATGGACCCATAATTTTTCTACAGCTTGGTGAAATCCCCACAGTGGTAATTTCATCAGCTAGACTTGCAAAGGAAGTGTTGAAAACCCATGACCTTGCACTTGCAAGCCGTCCACAACTGTTTTCAGCCAAGTACCTCTTTTACAACTGCACAGACATTGTTTTTGCCCCCTATGGAGCTTATTGGAGGCATATCAGAAAGATTTGCATACTTGAGCTTCTAAGCGCCAAAAGGGTACAATCATATAGTGCTGTTAGAGAAGAAGAGGTTGCTCGTCTAGTTCATAGGGTTGCAGGGTCTTATCCTGGAACTACCGATTTGTCCAAGATGTTGGGACTGTATGCAAATACTGTCCTTTGCCGTGTGGCATTTGGAAGGGACTTTTATGAAGGAGGAGAGAGCCAACGATATGGGTTCCAGAAGATGCTTNATGAGTACCAGGAACTCCTTGGAGGATTCAGTGTTGGTGACTTCTTTCCTTCCTTGGAGTTCATATACANCTTTACGGGTATNAAGGCAAGACTCCAGGACACTTCTCGGAAATTTGACCAACTCATTGATCAGATACTGAGTGAACACCGGGATTCCAATACAATAGAGNAGCATAATAAGGATCTTGTAGATGTTTTACTTGAGGTCCAGAAGAATGGCGCCTCGGNTGAGATGCCTCTCACCACTGATAACATTAAGGCAATAATTCTGGACATGTTTGCTGCTGGAACTGATACAACNTTCATTACCCTTGATTGGGCAATGACAGAGCTGCTAATGAATCCCCAGGCTATGGAAAAAGCACAGAAGGAAGTGCGTAGCATCCTGGGAGAAAGAAGAGTTGTTGCAGAGAGTGATCTGCATCAACTGCAGTACATGAGGGCTGTCATCAAAGAGGTCTTTCGCCTGCATCCCGCGGTTCCAGTTTTAGTCCCAAGAGAATCCATGGAAGATATTGTCTTAGATGGGTACAAGATTCCAGCTAAAACAAGATTCTTTGTCAATGCTTGNGCAGTAGGTAGGAACCCTGAAAGTTGGGAAGATCCCAATGCATTTAAACCAGAGAGATTTTTAGAGAGTNATATTGACTACAGGGGACAGGATTTTGAGCTGATACCATTTGGAGCAGGCAGAAGAGGTTGTCCAGCTATTACATTTGGTGTTGCAGTTGTTGAGCTTGCTCTGGCTCAACTCCTCTACAGCTTCGATTGGGAGCTTCCTCCTGNTGTTACAGCCAAAGACTTGGACCTCACTGAAGTTTTTGGCATCTCAATGCATAGGAGAGAAAATCTTCATGTTGTTGCTAAGCCGTNCTTTCTATAAAGACTCATGATACAGCAAGAAGAGCCTGTGAATTGTAGTCACTACTCAGTTAGTATTCGGCTATTAGTTAGTGTTAAGNAGTGAGAAAGCTATTGTGTGCAAAAAAGTAAGAAGACTTATAATTTGGATGAACTTGGTTTGTTTGGTAGTTTTCTACNTTCCTTTATCAGCTCAGCTGTTTCAAGTTGCATGGTGAATAAAAGGGCATTTAGAAGAGTTTATTTAAAGTTTAATTANGCTTACTTCACAACATAAGCACTTATATTAATATTTGGATACACTTATAAAAATAACTNATTACATGCTTACAAACTATTTTTTAGCTTATTTCAATAAGTTTCTTATAACATCTTATGAATAAACACTTGATTAAACTCTTTAGAATAAATTATGAAAAAGTGCTTATTTAAGTTGATTTCCAAAGATANCCTAAACGGAAATATGTTCACAAGGTCACATCCATAAACCCAGGGCAGAAATTATTTTGATAACAATGTGACGCCTGCAATCTATGCGTCTAAATGTTACCAAAATTTGTTTGTGCACACCAATCAGCTCGAGTAAGAGACAAAGAACAAGGAACTGAGAAGCATTTGCAATTCATCAATTAATCATTTAGTTTGATANTTTTTTTTTTCAACTTGATTNTACAATTTTGGGAAGGCAATGGAAATCACCAAACTGAAATGCAAGAATACATCCTTTGATGCTTAGAGAATCTTACTNGACTACCACTTAATGTTAACCTTTGTTACAAAATATCATCTTTTCAGAATTAGTCATGAACCTAATACAAGGAAGAAATGGCGAAATGCTAAATGGAGGCAAACGCACACAAACATATACACACACATTAATACCTTAATCCAGCAGTAAGAGGGCTTGTGCAACAATATAATCAGGTTTCAGAATCCATCTAGTACATATATTAACATTAATGGAGCAGAAATGTGACTTTTTTTTTGTTATGGAAATTTCTAAGAAAAATACAAGCATTTGGCCAAAAAAAAACACCAAATAGTGCATAGCCACATGGAAGGAACCTAAATTAAAATGACTGCCCAACTAAACTTGGATTTATAATCCCGTGGTAAGTCTAACTAAAGGATGGGGCAGTAAGCTTTTGCCAAGGGTCAGCATTCAAAATTGAGTTCCTTGGCCAGTTGTCTGACTTGTCTCTATATGCTCATCCACAACAAGGAACATAGTCTCCACAAGGATTAATCAAATCAATAATAGCTAAAAGGTAGCAATAGTATCTCAATGGGTCCTGATCTCCTGAAGATNGTGCCCAATTTGCTGAGCACCAATATATAATGCATCGGCAACAAGAAAGACTCCAATCTATGCCAGAAACAATCAAACTTGTGATGTCAAGATTGNGAAATGAAATTTACAACTTAAAGCACACAGTAATAGATAAATTACCAGGCGTGCAGAAAACACTAATCTGTATCCCCAACCTTCCTTGGCTGCTGCAGCTCTTTGTTGATCAGTCCAACTGGAAATAANCTTGCAGTCAGAAATTCGCAACCATATCTAAACAATGTCCTANGTTTTTAGAATATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00947	19337	23212	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B35

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000947s00021180.1	PF00067.17	p450	67	522	1.40E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.365
SRR1783600	control	2.541
SRR1783602	moderate drought stress	4.307
SRR1811619	moderate drought stress	4.268

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.390
DRR006520	Root Summer glycyrrhizin high producing strain	3.563
DRR006521	Root Winter glycyrrhizin high producing strain	20.243
DRR006522	Root Winter glycyrrhizin high producing strain	20.360
DRR006523	Root Summer glycyrrhizin low producing strain	4.681
DRR006524	Root Summer glycyrrhizin low producing strain	5.636
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.350
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.593

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.439
SRR2868004	Drought Stress (root)	1.657
SRR2967015	Control (root)	1.332

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.694
SRR9715740	Leaf	19.173
SRR9715741	Leaf	14.059
SRR9715739	Root	1.823
SRR9715742	Root	1.614
SRR9715743	Root	1.612

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.350
SRR8749028	MeJA induced 9h	4.605
SRR8749029	MeJA induced 9h	3.122
SRR8749030	Uninduced	3.166
SRR8749031	Uninduced	1.786
SRR8749032	Uninduced	3.070

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.434
SRR8400027	Control - Root	4.081