Gene detail

Gene detail information of Glyur000947s00021178

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G25180.1	4.00E-87	cytochrome P450, family 71, subfamily B, polypeptide 14
NR	XP_004501856.1	0	PREDICTED: cytochrome P450 71A1-like [Cicer arietinum]
COG	YP_001522972.1	5.00E-34	cytochrome P450 [Azorhizobium caulinodans ORS 571]
Swissprot	tr\|P24465\|C71A1_PERAE	6.00E-161	Cytochrome P450 71A1
trEMBL	tr\|G7J477\|G7J477_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES71402.1}

Sequence

Transcript Sequence

>Glyur000947s00021178.1
ATGGTGCAATCCTTTCAGCCAATTAGAGAGGAAGTAGCAGCAGAATTGGTTGACACGTTAAGAGAGGCATGTGAAAGTAAAAAGTACTCTTCTGTGAATTTGAGTGAGATGCTGATTGAAACTTCAAACAACATAGTGGCTAGGTGTGTTCTTGGACAAAAATATGAATATGATACCCAAGATGGTGATGGTAGTGGCAGCTTTGGAGAGTTAGCGAGGAAGATGATGAAACAATTGGCAGCTTTTAGCGTGGGAGATTTCTTCCCTTCATTGGGTTGGGTTGACATTCTTACAGGACAAATAACAGAATTTAGGGCCACTTTCTCTGCATTGGATGCTTTCTTTGATCAGGTGATTGCAGATCACAAGAGAATGAAGAAGAGGGAAGATGGTCAATCAGATAAGAAAGACTTTGTGGATATACTCCTTCAAATTCAAGAGGGTGGAAGGCATGATTTTCAGCTCACACATGAAAACATCAAAGCAATCCTAATGAATCCAAGTACCATGAAGAAAGCCCAAGAAGAAATAAGAAGAGTTGTGGGGCATAAACTAAAAGTAGATGAAAATGACATGAATCAAATGAACTGCCTGAAATGTGTAGTCAAAGAAGCATTGAGATTACATCCACCTGCTCCTCTTTTGACACCTAGAGAGACTTTATCTGATGTGAAAGTAAAAGGGTTTGATATTCCGTCCAAAACAAGAGTGTTTGTGAATGCATGGGCAATTCAGAGGGACCCTGAGTTTTGGNACAGGCCTGAAGAGTTCATTCCTGAGAGATTTGAGGAACAACCAGAAATTGATTATAAAGGACAAGATTTGCAATTTATCCCCCTTTGGGGATGTGCTGGAATTACATTTGGGCTTGCTTCCACTGAGTTTGTGCTTGCTAATCTCTTGTATTGGTTCGATTGGAAGCTGCCTAAGATTGGTGTGATTATGCAAGACATAGACATGAGTGAGATATATGGGATCACTGTTTGCAAGAAACAAGTGCCGTATGACCAAAATGCCACCCTTTTCATGTTTCTTCCCTTATTCTTCATCAGCATGTTGCTGGTGTTTAAGTTCACAAGAAGAAGGAGCAAATTGAACCTACCTCCATCCCCACCAAAATTGCCATTAATTGGCAACTTCCATCAACTAGGANCATTGCCTCATCGCTCTTTCCACGCCCTCTCACAAAAGTACGGTCCTTTAATGTGGTTACAACTGGGTCAGCTTCCCCTGTTGGTGGTTTCCTCTGTAGACATGGCCAGAGAGGTCATGCAAACCCATGACATAGCTTTTGCAAGCAGACCCCACCTCACATCAATGAAAGCCTTACTCTATGAATGTAAGGATATTGCTTTTGCATCCTATGGTGAAACATGGAGACAGAAAAAGAAGCTGTGTGTGATTGAATTGCTAAGCCAGAAAAGGGTGCAATCGATCCAGTTCATCAGGGAAGAGGAGGTTGAGGCTTTGGTTGATAAGATACGTAAAGCAAGTAATGGTGGTTGCAGCACTGGTTTGAACCTTAGGGAGATGCTAGTTGCAACTGCGAACAACATAATCTGTAGGTGTGTGTTTGGGAGGAAATATGATGTTGAAGGGTGCAGAGTGGGAGAGCTTGGGAGGAAGATAATGGATCATGTCTTGGATATTAGTGTGGGGGACCTGTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACTGGCCAGATTAATAAANTTAAGGCCACTTTTGGAGCAATGGATGATTTCTTTGACCATGTAATTGCAGAGCGTAAGATGGGAAGGGGGGACTCCAAGAATAAAGATTTTCTTGACATTCTGCTTCAGCTTCAGGATGATGGCATGTCAGAGTTCGAGCTCACTCAAGATGACTTAAAAGCACTCATCATGGACATGTTTTTGGGAGGAAGTGACACAACTTCAACAACAGTAGAATGGGCTATGACAGAGCTNGTAAAGAATCCAATGATAATGAAGAAAGCCCAGGAAGAGGTAAGGAGAGTTGTAGGGAACAATAAATCAAAAATTGAGGACAGTGATGTGAGTCAAATGGACTACTTAAAATGTGTAATCAAGGAAACTTTAAGGTTACATCCAGCTGCTCCTCTCCTGGCTCCTCACGAAACAACATCTAGTGTGAAACTCAGAGGGTATGATATTCCTGATAAAACAATGGTATATGTCAATGCATGGGCGATTCAGAGGGACCCTGAATTTTGGGAAAGGCCTGAAGAGTTTCTACCTGAGAGATTTGAAAGCAGCAAGGTGAATTTCAATGGTCNTGACTTTCAATTTATACCGTTCGGTTCTGGGAGAAGAAAATGCCCAGGTATAGCGTTTGGGCTTGCTTCCGCCGAGTATACGGTTGCTAATCTCTTGTATTGGTTTGATTGGAAGCTACCCACTACAAATGGTGCAACTGTTCAAGAACTAGACATGACCGAGAAATTTGGGCTCACTGTCAACAAGAAAGTGCCTCTCTATCTCGAACCAATATCATATGGTAATTCCTAAAGTGTGCCTCTCTATCTCGAACCAATATCATATGGTAATTCCTAAAGAATACCTCACTTTTTCTTATACTTGTGTGCCTGTTATGGACCCTGTTGAGGGTGATACTAATACTGCAGACCCAATGCCTTTGGGTTCTTGTCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00947	8498	17300	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B14

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000947s00021178.1	PF00067.17	p450	4	165	1.80E-11
Glyur000947s00021178.1	PF00067.17	p450	164	312	3.30E-37
Glyur000947s00021178.1	PF00067.17	p450	368	807	9.90E-106

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.079
SRR1783600	control	0.100
SRR1783602	moderate drought stress	0.211
SRR1811619	moderate drought stress	0.164

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.791
DRR006520	Root Summer glycyrrhizin high producing strain	0.825
DRR006521	Root Winter glycyrrhizin high producing strain	117.628
DRR006522	Root Winter glycyrrhizin high producing strain	113.357
DRR006523	Root Summer glycyrrhizin low producing strain	0.113
DRR006524	Root Summer glycyrrhizin low producing strain	0.051
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.137
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.014

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.396
SRR2868004	Drought Stress (root)	0.637
SRR2967015	Control (root)	1.070

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.837
SRR9715740	Leaf	0.190
SRR9715741	Leaf	0.601
SRR9715739	Root	0.110
SRR9715742	Root	1.309
SRR9715743	Root	1.377

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.091
SRR8749028	MeJA induced 9h	0.343
SRR8749029	MeJA induced 9h	0.299
SRR8749030	Uninduced	0.269
SRR8749031	Uninduced	0.168
SRR8749032	Uninduced	0.528

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.290
SRR8400027	Control - Root	0.166