Gene detail information of Glyur000943s00035108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 5.00E-41 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | KHN24396.1 | 7.52E-147 | Cysteine-rich receptor-like protein kinase 25 [Glycine soja] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 4.00E-48 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|K7MIQ1|K7MIQ1_SOYBN | 1.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G32726.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00943 | 85504 | 88050 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000943s00035108.1 | PF01657.12 | Stress-antifung | 36 | 135 | 1.80E-23 |
| Glyur000943s00035108.1 | PF01657.12 | Stress-antifung | 155 | 225 | 3.80E-10 |
| Glyur000943s00035108.1 | PF01657.12 | Stress-antifung | 246 | 345 | 1.80E-23 |
| Glyur000943s00035108.1 | PF01657.12 | Stress-antifung | 366 | 460 | 6.20E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.012 |
| SRR1783600 | control | 3.280 |
| SRR1783602 | moderate drought stress | 2.724 |
| SRR1811619 | moderate drought stress | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.979 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.846 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.435 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.605 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.343 |
| SRR2868004 | Drought Stress (root) | 3.862 |
| SRR2967015 | Control (root) | 5.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.184 |
| SRR9715740 | Leaf | 0.781 |
| SRR9715741 | Leaf | 0.090 |
| SRR9715739 | Root | 0.250 |
| SRR9715742 | Root | 1.227 |
| SRR9715743 | Root | 0.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.023 |
| SRR8749029 | MeJA induced 9h | 0.084 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.627 |
| SRR8400027 | Control - Root | 2.593 |