Gene detail information of Glyur000942s00027146 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78995.1 | 1.00E-20 | |
| NR | KEH24732.1 | 1.73E-55 | hypothetical protein MTR_6g004140 [Medicago truncatula] |
| trEMBL | tr|A0A072U4U7|A0A072U4U7_MEDTR | 6.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:KEH24732.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00942 | 76423 | 78066 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.007 |
| SRR1783600 | control | 14.292 |
| SRR1783602 | moderate drought stress | 12.641 |
| SRR1811619 | moderate drought stress | 12.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.406 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.905 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.173 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.304 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 108.125 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 107.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.766 |
| SRR2868004 | Drought Stress (root) | 13.285 |
| SRR2967015 | Control (root) | 11.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 104.074 |
| SRR9715740 | Leaf | 128.053 |
| SRR9715741 | Leaf | 84.884 |
| SRR9715739 | Root | 17.775 |
| SRR9715742 | Root | 10.831 |
| SRR9715743 | Root | 9.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.185 |
| SRR8749028 | MeJA induced 9h | 24.898 |
| SRR8749029 | MeJA induced 9h | 30.570 |
| SRR8749030 | Uninduced | 6.928 |
| SRR8749031 | Uninduced | 2.332 |
| SRR8749032 | Uninduced | 9.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.451 |
| SRR8400027 | Control - Root | 18.888 |