Gene detail

Gene detail information of Glyur000942s00027143

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G46915.1	Protein of unknown function (DUF3754)
NR	XP_004488966.1	PREDICTED: uncharacterized protein LOC101503998 isoform X1 [Cicer arietinum]
trEMBL	tr\|V7C0L1\|V7C0L1_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW22835.1}

Sequence

Transcript Sequence

>Glyur000942s00027143.1
GTAGCAGTTGATATGNTTGTAGTGGTTGTTCCTTGGAGTCCGAATCCAGCGAGATGTTGTTACAACTTCACATTCGCGACGAGCAACGCTCTTCCAAATCCAATTTCGCAATCGCAATCGCAATCGCAGCAGCAGCAGCAGCACTCCTTCCTCTCCTTCCCTTATCACTGCTACTCCTGTTCACAATCACAATCACTCAATATGACGAGGCNGAGGATTCCTTGTTCACGCCTTCAGGAAATGTCTGTCGAGGAGTCACCCTTACAACATCGAGAGAGCAGCAATTACTGTGAAAATCCCACTCCCAACAACAACAACAACTCAGACGCCGATGAGGATGATGANGAAGAAGTGGGAATTTCTAAAATACAAGTGCCGAGACAGAAACACATCCCGGTTTCCAAGTCCCAGCTTCTAGATTCCATCCTCTCCACCCTCTTTATCCAAGACCAAGACCAAGACGCCGCCCATCACTTTCGCCTTCTCACCTCAGTTACCATCTCTTCTCGTTTCCAACGTGCTTTCATGCAACTCCTTTCTGATGCACAGTTCGAAGAACTGTCAGCTAGGGATCTAATGTTAACATCTGCATTGAACACTGACTATCTCCTTACCTTGCCAATATATGTTGATTGGAAGAGAGCGTATGAGTCTAATGCCATAATATTTAGGCGGGGTTATGCAACTGAGAAGCAGAATGGCCTATTAATTGTTGAAAAACTGGATTACTTACAGTCTAAGCTTCTACGAACAATCTTCTCTGTTATATCAAAACCACTAGCAAAACTTGGCACCTGGATAAGCGAGCTTTATGAAAATGCCAGTCAGAGACATGAAGTACGAGATTGGACAGAAAGGTTGAAGCTTTGGCTAAAGGAACTGTCAGTATTTCAAAAATCATTGCTTTATAATGACAAAGCTTCAGATGAGCAAATAGGTATAAACCAAGTACCGAATGCAGAACTCCCTATTTGGCTGGCAGCTCAGAGAGCAGTAGCTCGATATGAAGGGATTTTGTTGCCAGTTGGTCCCCGTGAAAGGCTTTTGAGGAGATTGCTTTCTTGGGTTGGACTTATTCCCCCTACACCAGAAACACCATTTGAGGTTAACAATGAGAGTAACTCTCCTGAACCTTATTTAAGGCCTACCTTTTTATCAAGGATATCACTTAGTGATATATGGAGACCTGCAACAAGGAAATACTGCAGAAATGATCCTTGGAAAATGCTAAAAACTTCTATTTCCATACTTTTCTCACAGTCAGTCCTGCAGGAGCCAGCATTTGAAGAATTAATTCTGCTTTATACCAAGGAAGTCGGGGAAACAAGTGCTAAAGATAGAGCTGAGGTTCAATCATTGCAATTAAAGATCTATGAGAGAATTCCTATTCCAGATTTACCGGTAATTTTTCCTCACAAAAAGCTATCATTCCGCATCATAGACACAGTGCGCTTGGATGTTGCCTCAATTTTGGGACTTCTGGCATATTTCATAAACTACAAATTTGAGAATGTCGTATCTTCCCCATCAGCAGTATTACTTGATGTAGTTGCCATAAGTGCTCTAATAATATATGGAAGTCGTGTGGTTCTAGGCTACAAACAGACATGGGATCGGTATCAGCTATTAGTGAACAAGACACTTTATGAAAAAACATTAGCAAGTGGCTTTGGCTCAGTGCATTTTCTTCTAGATGCTTCTGAACAGCAGCAATACAAGGAAGCTATTTTGGCTTATGCCGTCCTGCTCAAAGCAGATAAGGGTCAGGTCACTTCTCGACAAAGTGTAGGAGAGAAATGTGAAAGATTCATGTATGAAGTGTTTAAAGTGAAGGTTGAAATGCCAATTGACAAGGCACTCAATACATTATTAAGGCTGAGTCTAGCAACTGAAACTTGTATTGATGGAAGGCATGGGTTACTGGCTATACCTTGTCCTCAGGCCTATGAGGCCCTTAAAGAACGATGGAATAGTTTGCTTTGTTAAAATGTACAATATGCACGTTCCATTGGTTACTGGAAACGACCTTTATAGTTTAGTTTACCCAAGAAAGGCACTGTATACCCTTCACGGCATCCGGTAATAGTTCTATAGGTAGNTGAGTCTGCGCATTATTCATCCTACCCTAGGATTTATAAAACAAAGTATCTNTATGTTGTGTAGATATGGGTACGGCACCGGTATTGTATATTGTATTGTATATTGTATATAGAAAAAAATTTAAGTTCTCTTCGGGTTGAGCCTATTTCATTTCTAGGAATGGATAAATGAATATGGGCTCCAATTTCTCAGAAGATGAGGATGGTTGTGAAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00942	36424	62260	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000942s00027143.1	PF12576.3	DUF3754	424	554	5.70E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.154
SRR1783600	control	13.294
SRR1783602	moderate drought stress	13.379
SRR1811619	moderate drought stress	13.458

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.793
DRR006520	Root Summer glycyrrhizin high producing strain	14.216
DRR006521	Root Winter glycyrrhizin high producing strain	7.384
DRR006522	Root Winter glycyrrhizin high producing strain	6.916
DRR006523	Root Summer glycyrrhizin low producing strain	13.159
DRR006524	Root Summer glycyrrhizin low producing strain	13.454
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.310
DRR006526	Leaf Summer glycyrrhizin high producing strain	18.705

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.884
SRR2868004	Drought Stress (root)	5.801
SRR2967015	Control (root)	6.354

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.644
SRR9715740	Leaf	29.390
SRR9715741	Leaf	18.509
SRR9715739	Root	2.078
SRR9715742	Root	7.470
SRR9715743	Root	7.250

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.482
SRR8749028	MeJA induced 9h	4.939
SRR8749029	MeJA induced 9h	2.885
SRR8749030	Uninduced	2.527
SRR8749031	Uninduced	1.575
SRR8749032	Uninduced	1.646

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.824
SRR8400027	Control - Root	13.263