Gene detail information of Glyur000939s00023546 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47580.1 | 2.00E-171 | |
| NR | XP_003550904.1 | 0 | PREDICTED: uncharacterized protein LOC100794740 [Glycine max] |
| trEMBL | tr|I1K0P3|I1K0P3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G04550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00939 | 34634 | 36898 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.993 |
| SRR1783600 | control | 6.200 |
| SRR1783602 | moderate drought stress | 9.090 |
| SRR1811619 | moderate drought stress | 9.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.085 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.197 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.192 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.256 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.460 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.329 |
| SRR2868004 | Drought Stress (root) | 12.449 |
| SRR2967015 | Control (root) | 13.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.862 |
| SRR9715740 | Leaf | 19.924 |
| SRR9715741 | Leaf | 65.240 |
| SRR9715739 | Root | 2.499 |
| SRR9715742 | Root | 17.378 |
| SRR9715743 | Root | 14.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.828 |
| SRR8749028 | MeJA induced 9h | 4.480 |
| SRR8749029 | MeJA induced 9h | 3.401 |
| SRR8749030 | Uninduced | 3.783 |
| SRR8749031 | Uninduced | 0.955 |
| SRR8749032 | Uninduced | 0.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.581 |
| SRR8400027 | Control - Root | 7.940 |