Gene detail information of Glyur000937s00031574 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21650.1 | 2.00E-27 | Homeodomain-like superfamily protein |
| NR | XP_003598418.1 | 2.73E-47 | RADIALIS [Medicago truncatula] |
| Swissprot | tr|Q58FS3|RAD_ANTMA | 9.00E-38 | Transcription factor RADIALIS |
| trEMBL | tr|G7IVT6|G7IVT6_MEDTR | 1.00E-47 | Transcription factor radialis-like protein {ECO:0000313|EMBL:AES68669.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00937 | 49137 | 49884 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.134 |
| SRR1783600 | control | 0.136 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.397 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.398 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.148 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.360 |
| SRR2868004 | Drought Stress (root) | 0.221 |
| SRR2967015 | Control (root) | 0.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.959 |
| SRR9715740 | Leaf | 20.611 |
| SRR9715741 | Leaf | 3.724 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.465 |
| SRR9715743 | Root | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.583 |
| SRR8400027 | Control - Root | 3.980 |