Gene detail information of Glyur000934s00021591 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03970.1 | 2.00E-58 | F-box associated ubiquitination effector family protein |
| NR | XP_003554715.1 | 0 | PREDICTED: F-box protein At5g03970-like [Glycine max] |
| Swissprot | tr|Q94A64|FB251_ARATH | 5.00E-78 | F-box protein At5g03970 |
| trEMBL | tr|K7N055|K7N055_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G43610.2} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00934 | 58853 | 61937 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.487 |
| SRR1783600 | control | 12.503 |
| SRR1783602 | moderate drought stress | 18.973 |
| SRR1811619 | moderate drought stress | 18.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.770 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.910 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.830 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.339 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.223 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.986 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.514 |
| SRR2868004 | Drought Stress (root) | 13.543 |
| SRR2967015 | Control (root) | 15.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.895 |
| SRR9715740 | Leaf | 6.424 |
| SRR9715741 | Leaf | 6.205 |
| SRR9715739 | Root | 4.396 |
| SRR9715742 | Root | 6.016 |
| SRR9715743 | Root | 6.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.096 |
| SRR8749028 | MeJA induced 9h | 7.989 |
| SRR8749029 | MeJA induced 9h | 5.100 |
| SRR8749030 | Uninduced | 2.467 |
| SRR8749031 | Uninduced | 1.351 |
| SRR8749032 | Uninduced | 1.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.925 |
| SRR8400027 | Control - Root | 14.430 |