Gene detail information of Glyur000934s00021589 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007147197.1 | 3.62E-24 | hypothetical protein PHAVU_006G103800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BRJ8|V7BRJ8_PHAVU | 1.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:ESW19191.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00934 | 39158 | 39634 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000934s00021589.1 | PF05678.9 | VQ | 49 | 67 | 4.70E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.580 |
| SRR1783600 | control | 0.736 |
| SRR1783602 | moderate drought stress | 1.770 |
| SRR1811619 | moderate drought stress | 1.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.743 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.405 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.282 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.787 |
| SRR2868004 | Drought Stress (root) | 30.716 |
| SRR2967015 | Control (root) | 29.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.976 |
| SRR9715740 | Leaf | 51.636 |
| SRR9715741 | Leaf | 42.999 |
| SRR9715739 | Root | 1.689 |
| SRR9715742 | Root | 6.398 |
| SRR9715743 | Root | 5.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.951 |
| SRR8749028 | MeJA induced 9h | 0.424 |
| SRR8749029 | MeJA induced 9h | 1.275 |
| SRR8749030 | Uninduced | 17.792 |
| SRR8749031 | Uninduced | 11.528 |
| SRR8749032 | Uninduced | 6.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.253 |
| SRR8400027 | Control - Root | 9.717 |