Gene detail information of Glyur000934s00021586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05740.3 | 2.00E-15 | ethylene-dependent gravitropism-deficient and yellow-green-like 2 |
| NR | KHG22482.1 | 3.88E-27 | Peroxisomal biogenesis factor 2 [Gossypium arboreum] |
| COG | YP_007127012.1 | 5.00E-07 | peptidase M50 [Gloeocapsa sp. PCC 7428] |
| Swissprot | tr|Q9FFK3|EGY2_ARATH | 1.00E-19 | Probable zinc metalloprotease EGY2, chloroplastic (Precursor) |
| trEMBL | tr|A0A067G004|A0A067G004_CITSI | 2.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:KDO69042.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00934 | 21902 | 22355 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.111 |
| SRR1783600 | control | 1.083 |
| SRR1783602 | moderate drought stress | 2.268 |
| SRR1811619 | moderate drought stress | 2.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.112 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.545 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.644 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.207 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.598 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.617 |
| SRR9715740 | Leaf | 3.354 |
| SRR9715741 | Leaf | 0.217 |
| SRR9715739 | Root | 2.718 |
| SRR9715742 | Root | 0.391 |
| SRR9715743 | Root | 0.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.485 |
| SRR8400027 | Control - Root | 0.732 |